| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2415 |
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| Symbol | |
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| ID | 6410077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2603123 |
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| End bp | 2605462 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712294 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001991404 |
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| Protein GI | 192290799 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGGGC TTAACTCGCG CGCCTACGCG CTATTGCTTT CCGTATCCGT CGTCGCGCTG
ACGACCGCGC CGGCTTCGGC GCAAACCGCG ACCGGAAGCT CAACGTCCTC CGCTCAGACT
CAGGTGAAGC GCGACCGTGC GGCGCGCACC GCGCAGCCGG CGGCGCCTGC CGCCGATCCG
CGTAACGCCA ACGCGCAGGC GGGCAGTTCG ACGCAGTCGC TCGACGCCAT CACCGTGGTG
GCGACCAAGA ACGAGGAGAA GGCGATCGAT GCGCTGGCGC CTGCCAGCGC GATCACGCTG
CAGCAGATTC AGCAGTTTCC GCCGAGCCGG CTGCAGGATG TGTTCGTCGC CACGCCCGGC
GTGTCGTTCC AGGATCGGGG CGACGAGCCC TCGACCTCGA TCAACATCCG CGGCCTGCAG
GATTTCGGCC GTGTCGCCGT GGTGGTCGAC GGCGCGCGGC AGAACTATCA ACGTTCCGGT
CACGGCGCGC AGGGCTCGTT CTTCCTCGAT CCCGAACTGA TCGGCGGCAT CGACATCGTC
CGCGGCCCGA GCGCCAATAT CTACGGCTCC GGTGCGATCG GCGGCGTGGT GTCGTTCCGC
ACCAAGGACA TCGACGACGT GGTGCGCGCC GGTGAGCGCT GGGGCGTCGA CCTCAGCGGC
TCCTATGGCA GCAACAATGC GCGCGGGCTC GGTTCGGTGT TCGGCGGCGT GCGGGTCGAT
CCCAGTGTCG ACGTGTTCGG CGGCGCGGTG TACCGCACGC AGGGAAACTA CAAGGATGGT
GCCGGCACCG AAATCGGCAA CACCGGCAAT GATCTCGCTG CCGGCTTGAT GAAGTTCACG
GTGCGCCCGG CGGATGGCCA CGAGGTCAAG ATCGGTGGCA TCTTCCAGGA CTTCAACTAC
GATGTCGGCC AGTTCAATCG CGGCCCCTCT CAGCAGGCCC TGTATCAGGG CTCCTCAGTG
TACAGTACCA GCCTGCAGAA TTACACCGGC ACCCTGAGCT GGAAATATTC GCAGCCTGAC
GACACCTGGT TCGACTGGAG TGTCAACCTG TACGGCAACC GCACCAACAG CGACCAGACT
AAAACCTATC ACTATTCGAC CAGCGGTTCG GGCTATTGCG GCGCCGGAAA TTACGGCAAT
AACATCTCTG GCTGCATCGG CGACAAGCGC GGCTACAACC TCGACACCAT CGGCATCGAC
GCCAACAACA CCTCCCGCTT CGAATACGGC AACTGGAGGA CCGCGGTCAC CTACGGCGTC
GACGTCTTCA ACGACAAGGT GACGACCTGG GATTCGCGCG GCAACTCGAA CATCACCACC
CCGGGCGGCG AGCGCACGGT ATCGGGTGGC TTCATCCAGG TGAAGAATAA CTACGCGCAA
TGGCTCGAAG TGATCGGTGC CGCGCGCTAC GACCATTATG AGCTGAATTC CAATTCGTCG
ACCGCCAGCG GCAGCCGGCT GTCGCCGAAG GTGACCCTCG GCCTGACGCC GATCGCCGGC
TTCACGCCCT ATGTCGCCTA CGCCGAAGGC TATCGCGCGC CGTCGATCAC CGAAACGTTG
ATCGCTGGCG CTCACGCCAC GGGCGGCGGT CCGGCACTGT TCACCTGCGC CGATGGCACG
TCCGGCCTAT TCTGCCTGAT CCCCAACACC GCGCTGCGGC CGGAGGTCGG CAAGAACAAG
GAAGTCGGCA TCAACCTGAA ATACAACGAC GTGTTCATCT CGGGCGACAG CTTCCGCGGC
AAAATTAACG CGTTCCGTAA CGACGTCGAC AACTACATCG AGCTGCTCGG CTCGACTCCC
CAGGCGTACA GGACCGTGTT CATGGGCTTC CCGGTGTCGG GTGTCGCCAG CAAGTATTAC
CAGTACCAGA ACATCCCACA TGCGCGCATC GAGGGCGTCG AGGTCGAGAC CTCGTACGAC
GCCGGCATGT GGTTCGTCGG TGTCAGTGCC GCCGTAATCC GCGGTACCAA TCCGGACACT
GGCCTTGGCC TGGTCTCGGT GCCGGCCCGC AAGGTTGTCA CCACCGGTGG TCTGCGGCTG
CTCGACCGGC AGCTGACGAT CGCGGCGCAA TGGGCATCTT ACGCCGCCAA CACCAATCTG
CCGACCGGCT ATTTGCCGGG AACCTCGTAC GATCTCGTCA ATCTTAATAT CGCCTATCGG
CCGACCGCGG ACGTGACGCT GAATTTCTCG ATCGATAACC TGCTCAACAA TTACTATCGT
CCGTATGCAA TCCCTGGATC GTCAAGCGAC GGCACCACGC AAAACGACAT CTTGTGGACG
AGTCCTGGCC CTGGCGTCGT TTACAAGGGA GGGATCAAGG TTCACTTCGG AGGAGCGTGA
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| Protein sequence | MVGLNSRAYA LLLSVSVVAL TTAPASAQTA TGSSTSSAQT QVKRDRAART AQPAAPAADP
RNANAQAGSS TQSLDAITVV ATKNEEKAID ALAPASAITL QQIQQFPPSR LQDVFVATPG
VSFQDRGDEP STSINIRGLQ DFGRVAVVVD GARQNYQRSG HGAQGSFFLD PELIGGIDIV
RGPSANIYGS GAIGGVVSFR TKDIDDVVRA GERWGVDLSG SYGSNNARGL GSVFGGVRVD
PSVDVFGGAV YRTQGNYKDG AGTEIGNTGN DLAAGLMKFT VRPADGHEVK IGGIFQDFNY
DVGQFNRGPS QQALYQGSSV YSTSLQNYTG TLSWKYSQPD DTWFDWSVNL YGNRTNSDQT
KTYHYSTSGS GYCGAGNYGN NISGCIGDKR GYNLDTIGID ANNTSRFEYG NWRTAVTYGV
DVFNDKVTTW DSRGNSNITT PGGERTVSGG FIQVKNNYAQ WLEVIGAARY DHYELNSNSS
TASGSRLSPK VTLGLTPIAG FTPYVAYAEG YRAPSITETL IAGAHATGGG PALFTCADGT
SGLFCLIPNT ALRPEVGKNK EVGINLKYND VFISGDSFRG KINAFRNDVD NYIELLGSTP
QAYRTVFMGF PVSGVASKYY QYQNIPHARI EGVEVETSYD AGMWFVGVSA AVIRGTNPDT
GLGLVSVPAR KVVTTGGLRL LDRQLTIAAQ WASYAANTNL PTGYLPGTSY DLVNLNIAYR
PTADVTLNFS IDNLLNNYYR PYAIPGSSSD GTTQNDILWT SPGPGVVYKG GIKVHFGGA
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