Gene Rpal_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2414 
Symbol 
ID6410076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2602234 
End bp2602905 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID642712293 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001991403 
Protein GI192290798 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.596261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTTC TGATTTTCGG CGCCACCGGC CGCACCGGGC GCCATTTAGT GGCGCAAGGC 
GTCGCCCGCG GCTGGACGGT GTTCGTCGCT GGCCGCGATC CGGCGCGATT GAACGAACTC 
GGCGGCATTG CCGGCGTCGC GAGTGTCGAT GTGGCGGACA CCACTTCGGT GGCGGGGGCG 
CTGAACGGAT TGAAGCCGCA GGCGATCGTC TCGACGATCG GCGGCGCCGG GCCTGACGCG 
CTGCTGATCG ATGAAGTCGG CAACAACGCG ATCACCGACG CCGCGGCGGC GTGCGGCGTG 
CGGCGGGTGC TTCAGGTCTC GTCGCTCGCC TGCGGCGATA GCCGCGCCTA TGCGTCGGAA 
CGAATCATTG CCGCGATCGG GCCGGTGCTC GACGCTAAGA CCCGCGCCGA AGACCATCTG 
CGCAACGCCG CGCTCGACTG GACGATCGTG CGGCCGGGCG GGCTGACCGA CGGCGACCCC 
ACCGGGCAGG GGGCGCTGTA CGACGATCCC CGGGTGCACG GCCGGATCGC GCGGGCGGAC 
CTCGCCACGC TCCTGATCGA CGCGCTGGCG ACGCCGGCCA GCATCGGCTG CGTGCTGTCG 
GCGGTCGATC GCACGACGCT GCCGGCTGAA CCAGCCGATA TCGCTGAATT CGATCTCGCC 
GCGACGGTGT GA
 
Protein sequence
MRVLIFGATG RTGRHLVAQG VARGWTVFVA GRDPARLNEL GGIAGVASVD VADTTSVAGA 
LNGLKPQAIV STIGGAGPDA LLIDEVGNNA ITDAAAACGV RRVLQVSSLA CGDSRAYASE 
RIIAAIGPVL DAKTRAEDHL RNAALDWTIV RPGGLTDGDP TGQGALYDDP RVHGRIARAD 
LATLLIDALA TPASIGCVLS AVDRTTLPAE PADIAEFDLA ATV