| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2411 |
|---|
| Symbol | |
|---|
| ID | 6410073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2599281 |
|---|
| End bp | 2600252 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642712290 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001991400 |
|---|
| Protein GI | 192290795 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGA TCGCTCACGT TAAACGCCGC CGCGCCGCCC TGTTCGCCGC GACGCTACTC
GCTGGTTCCT TCTCGCTGCC GGCCATCGCC GCCGAGATCA AGGTGCGCGA CGCGCACGGC
CGCGACGTCA CCGTTGCGGA TTCCTCACGC ACGCTGTCGA TCGGCGGCGC GATCACCGAG
GTGCTGGCCG ATCTCGGCCT GGCGCAGCGG ATCGCGGGCG TCGATTCCAC CAGCGTGTAT
CCGCCTGAGG CCGTCGCCGG AAAGCCCAAT GTCGGTTACT TGCGACAACT ATCGTCGGAA
GGCGTGATCG GCCTGAACCC GACGCTGATC CTGGCGATGG ATTCGGCCGG TCCGAAGCAG
ACGATCGATG CGATCACTTC GGCCGGCATT CCGCTGGTGT CGGTGCAGGA GGCTTATTCC
GAACAAGGCC TGCTCGACAA GATCGCGCTG ATCGGCCACG CCATGGGCGC CGACAAGGCC
GCGACGTGTC TTGCCTCCGC GGTCGGCGAC GACTTCACCA CGCTGCGCAA GCTGCGCGCG
GCGATCACCA AGCCGGTACG CGTGATGTTC GTGATGTCGC TCGTCAACGG CCAGGCGATG
GCGGCTGGAC GGAACACCGC GGCGGATTCG ATCATTGCGC TCGCCGGCGG CGTCAACGCG
ATCGATGGCT ACGACGGCTA CAAGGCGATC AACGACGAGG CGATCGTCGC AGCACGTCCC
GATGTCGTGC TGACGATCAA GCGCAGCCGC GATTCCTTCG AGGCCGACGC GTTTTACGCC
CATCCGGCGT TCTCGCTGAC GCCAGCCGGC CAGCACCGTG CCTTCCTGGC GATGGACGGA
CTATACCTGC TCGGCTTCGG GCCGCGCACG CCGGCTGCGG CAGTCGAGGT CGCATCGAAA
CTGTATCCGC AGCTCGCAGC CGAGGCCGCC GGCTTCAAGC CGAAAGCCAC CACGGTCGAT
TGCCGCTCAT GA
|
|---|
| Protein sequence | MIAIAHVKRR RAALFAATLL AGSFSLPAIA AEIKVRDAHG RDVTVADSSR TLSIGGAITE
VLADLGLAQR IAGVDSTSVY PPEAVAGKPN VGYLRQLSSE GVIGLNPTLI LAMDSAGPKQ
TIDAITSAGI PLVSVQEAYS EQGLLDKIAL IGHAMGADKA ATCLASAVGD DFTTLRKLRA
AITKPVRVMF VMSLVNGQAM AAGRNTAADS IIALAGGVNA IDGYDGYKAI NDEAIVAARP
DVVLTIKRSR DSFEADAFYA HPAFSLTPAG QHRAFLAMDG LYLLGFGPRT PAAAVEVASK
LYPQLAAEAA GFKPKATTVD CRS
|
|---|
| |