| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2405 |
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| Symbol | |
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| ID | 6410067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2594793 |
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| End bp | 2595680 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712284 |
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| Product | nitrate ABC transporter, ATPase subunits C and D |
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| Protein accession | YP_001991394 |
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| Protein GI | 192290789 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.175275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACG ACAAGTTCAT TTCGATCGAG GCGATCGCGA AGCGTTACCC GGCAGCGGGC
GGGGGACAGA CCACGATCTT CGAAAACCTG TGGCTGTCGC TGCCGCGCGG TGAATTCGGC
TGCGTAATCG GGCACTCTGG TTGCGGCAAG ACCACTGTGC TCAACATCCT CGCCGGCCTC
GACCAGCCGA CCGAAGGCGC GGTGATCGTC GACGGACAGG CGATCGAAGG CACCAGCCTC
GACCGCGCGG TGATCTTCCA GAGCCACGCG CTGCTGCCGT GGCGCACCGT AATGGGCAAC
GTCGCCTATG CGGTGTCGTC GAAATGGCGC GACTGGGACA AGGCCAAGGT CCGCGCCCAT
GCGCAGCGCT TCATCGATCT GGTCGGCCTG ACCGGCTCCG AGCACAAGCG TCCGTCCGAG
TTGTCCGGTG GCATGAAGCA GCGCGTCGGC ATCGCCCGGG CGCTGTCGAT TACGCCGAAG
ATCATGCTGA TGGATGAGCC GTTCTCGGCG CTCGACGCGT TGACCCGCGG TTCGCTGCAG
GACGAGGTGC GGCGGATTTG CCTGGAGACC GGGCAGACCA CTTTCATGAT CACCCACGAC
GTCGACGAGG CGATGTATCT CGCCGACAAG ATCTATCTCA TGACCAACGG CCCTGGCGCA
GTGATCGCCG AGATCGTCGA GAACCCGCTG CCGAAGGACC GTGCCCGGAT CGATCTGCAC
CGGCATCCTT ACTACTACGG CCTGCGCAAC CACATCGTCG ATTTCCTGGT GACGCGCAGC
AAGACCTTCA CCAGCAACAA TCCGAACCAC GATCCGCTGC ACGTGCCGAT CGTCCGGCCC
GGCGTCGAGG ACGCTGCGCC CGTGCCGATG CAGGCGAACG CCCGCTGA
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| Protein sequence | MTNDKFISIE AIAKRYPAAG GGQTTIFENL WLSLPRGEFG CVIGHSGCGK TTVLNILAGL
DQPTEGAVIV DGQAIEGTSL DRAVIFQSHA LLPWRTVMGN VAYAVSSKWR DWDKAKVRAH
AQRFIDLVGL TGSEHKRPSE LSGGMKQRVG IARALSITPK IMLMDEPFSA LDALTRGSLQ
DEVRRICLET GQTTFMITHD VDEAMYLADK IYLMTNGPGA VIAEIVENPL PKDRARIDLH
RHPYYYGLRN HIVDFLVTRS KTFTSNNPNH DPLHVPIVRP GVEDAAPVPM QANAR
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