Gene Rpal_2401 details

Gene Information

• Locus tag: Rpal_2401
• ID: 6410063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2589677
• End bp: 2590285
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642712280
• Product: transcriptional regulator, AraC family
• Protein accession: YP_001991390
• Protein GI: 192290785
• COG category: [K] Transcription
• COG ID: [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCGA TCACCGCACC CAGAGCCGAA GCCATGTCCC GGTTAGCCAG CCCAAGCGAG 
GCCTTTGCGT GTCTGGCGGA GATGCTTCAG GAGGCATCCG ACGCGGTCGA GGACGATCCG 
TTCGCCGCCC GGGCGTGCCT GGCCCGGGCC ACGATGTTGC TGCGTGAGGT CCAGGCACGT 
CATGCTCCGG AGGCGTCCGC CGAACGTCCC GATCAGTCGC AGGCTCTCGG GCTGGCGCGC 
TGGCAGCTCA ATCGTGTGCT GCTGTATGTC GATCAGCACC TAGGGGAAAG CCTTCTGATC 
CGGGATCTGG CGCAACTGAT CGATCTCAGC CCCGGCCATT TTGCCCGTGC GTTTCGGCGC 
AGCACCGGGG TGGCTCCGCG TGGGTTCGTG CTCGAGCGCC GGGTCGCGCG CGCCAAGCAA 
CTGATGCGGA CGACGGATCT GCCGCTTTCC GAAATCGCAC TTGCCTGCGG ATTAAGCGAT 
CAGGCGCATC TGTCGCGTAT CTTCCGCCGC TACACCGGGA ATACGCCGAA TGCCTGGCGC 
CGCGAATGGC ACGACCGGCC GAGCTCCGCC GGGCGGCGAG ACGATGAGCC CCGGGTCGCT 
TCGCTGTAA 

 

Protein sequence

MTAITAPRAE AMSRLASPSE AFACLAEMLQ EASDAVEDDP FAARACLARA TMLLREVQAR 
HAPEASAERP DQSQALGLAR WQLNRVLLYV DQHLGESLLI RDLAQLIDLS PGHFARAFRR 
STGVAPRGFV LERRVARAKQ LMRTTDLPLS EIALACGLSD QAHLSRIFRR YTGNTPNAWR 
REWHDRPSSA GRRDDEPRVA SL