| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2398 |
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| Symbol | |
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| ID | 6410060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2583206 |
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| End bp | 2588344 |
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| Gene Length | 5139 bp |
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| Protein Length | 1712 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712277 |
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| Product | ATP-binding region ATPase domain protein |
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| Protein accession | YP_001991387 |
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| Protein GI | 192290782 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.623096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGAT CTGATTGGCG GGCCGAGCGC CACGACTGGA TCGGTGCCGT GAAACAGATC
GACGCTCCGA TGGAATTGGT GCGGCGCGAA GGCGGTTTGA GCGTCTTTCG GCGCCGAGCC
GACGGCATCA ATCCACCAAG CCTCGTGGTG CTGGCCGATC TCGACGATCC TCCAGCGGCA
CAGCAGCTTA CCCGTGAATT CGCCCTCACC CGCGATCTCG ATGCTGACTA CGTCCTCCGC
CCGCGCGAAC TGGTGACAAT CGACGGCCGT ACCGCGCTGA TCATCGATGA CCATAACGCA
CAGCCTCTCT CCGAGAAAAT CGGGCAGCCG TTGCCGGTGG CGCGGCTGCT ACGTTGGGGC
ATCGGCATCG CACAGGCACT CGGACACATC CATGGCAAAG GCCTGATCCA CCGAAATCTG
AGCCCGGACG CGGTTTGGAT CGATCCATCC GACCGCGTCT GGTTGACATG CCTCGCCTGC
GCCTCGCGGC TTAACCGCGA GCGACCCGAT ATGTTTGGCA CCGAGATCGG ATCGCCGACC
TACATGTCGC CGGAGCAGAC TGGAAGGCTC AATCGCTCGA TCGATGCGCG GAGCGATCTC
TATGTCTTCG GCATCCTGCT CTACCAGATG CTAGCCTCGG GCAGCCTGCC GTTCTTCGCT
TCCAGCCCGG GCCAGTGGAT CCACTACCAC ATCGCCCGCA AACCGAACCC GCTGCCGAAC
GCTTCGGCAG CCACCTCCGC GATCGAACGG ATCGCATTGC GGCTGCTGGA AAAATCCGCG
GATGACCGGT ACCAGACCGC GATCGGCGTC GAGCGCGATA TGCGGGCCTG CCTCACCGCA
TGGGAGACTG ACGGCACAAC GGCCGCCGTC AATCTGACCG AGCACGACGC CGCCGGCATC
GTCCGGATGC CGGAGAAGCT GTACGGCCGG GAGGGCGAGA TCAACGCGAT CCTGTCTGCC
TACCACCGTG CAGCCTCGAC CGGCACCACC GAATGGGTCC TGATCTCCGG CTATTCCGGC
GCCGGAAAAT CATCGGTGGT CAGCGAGCTG CGCAAGAGTC TTGCGCCGAC CAATGGCTGG
TTCATCGCCG GCAAGTTCGA TCAGTACAAA CGCGACATCC CATTCGCCAC GCTCGCCCAA
GCATTTCGAT CCCTGGTACG ACAGATCCTC GGTCTCGACT GCGGAGAGCT GGACCAATGG
CGCACTGCGC TGCAGGAAGC CGTCGGCGAG CACGGCGAGC TGATGGTGAA TCTGGTCCCC
GATCTCGCTC TGGTGATCGG CGAGCAGCTG CCGCTGCCGG ACTTACCGCC GCAGGAGAGC
AAGAGCCTAT TTGAGGCCGT TCTGGCCCGC TTCCTCGCCG CGATCGCGCG TGCGGAGCAT
CCGCTGGTGC TGTTTCTCGA CGACCTGCAA TGGCTCGACA AGGCGACCTC CGAATTTCTG
GTGCGGCTTG CGCAGAACAT CGACACCCGT CATCTTCTGC TCGTCGGCGC TTATCGCGAC
AACGAAGTGG ACGACAACCA TCCGCTCTCT TGCGCGCTGG CGGAGATCCG GCACAGCGTG
TCGCATATCG AAGAGATCCG CCTTGCTTCG CTCAGCGCAG ACGACATCTG TGCGCTGGTC
TCAGACGTTC TGCGCGCCGA GCCGGACCAC GTCGCCCCGC TGGCGGCGCT GATCCATCGC
AAGACAGGTG GCAATCCGTT CTTCGCGATC CAGTTCTTTT CGTCGCTGGT CGACGAGCAG
CTCGTCAGCT TCCATCTGAT GCATCACGAG TGGATCTGGA ACATCGATCT GATCGACGAA
AAAGGCTTCA CCGACAACGT CGTCGATCTG ATGAGCCGGA AGCTCCACCG GCTTCCGTCG
CGTACCCGAG ACGTGCTGCA GACGTTCTCC ACCCTTGGCA TGAGTGCGGA AGCGTGCCTG
TTGGCGCAGC TCCGCGACAT CACTGCGGAG GACGTCCACG AGGCGCTGCA GGACCTCGTC
GCCAACGAAC TGCTGTTGCG CACCGAGGAC GATTACCTGT TTGTGCATGA CCGCGTGCGC
GAGGCCGCCT ACCGGCTGAT CGATCCTGCG GATCTGCCGA CCGAGCATCT GGCGATCGCC
CGGCACCTTG CCAACTCCGT TCCGACCTCG TCCGACGCGC TGTTCAGCAT CGCCAATCAC
TACAATCTCG GCGCACCGCT GCTGTCATCC CGCTCGGAGA TGGTGCTGGC CGCTGGCTAC
AATCTGAAGG CTGGCCGCGC GGCCAAGAAG GCGATCGCCT ACAGTTCGGC GCGGGTTTAT
CTCGCGGCGG CGCTTGACCT GCTCGGCGAG CATCGATGGA CCGAGCAGCC CGATCTGGCC
TACGAAGTCG AATATCAGCT CGCCGAATGC GAATTTCTAA CCGGCTCCCT GACCGAAGCT
GAGGAGCGGC TGCGCCAGCT CGTATCCAAG GCGCGTGGCG ACGTCGCGAT TGCTGCCGTG
GTTGCGCTGC AGATCACACT CTACACCGCG ATGGATCGCA GCGACCTCGC GATCGAGGTG
TGCCTCGCCT ATTTGCGCAA TGTCGGCATC GTCTGGTCGC GGCATCCGGA TCGCCAGGAG
GCAAGCGCCG AATATCAACT GCTGACCCAG CGCATCGGCA GCCTCAGCAT TGAGTCCCTG
CTTGATCTTC CGACCTCGAC GGACCGCTCG CGATCGGCGG CGCTCTCGGT CATGACGGCA
GCGCTGGCGC CAGCGTTCTT CACCGATCTT AACTTGGTGT GCTTGCTGCT GTCCCGGATG
GCCAATCTGA GCATTCAGCA CGGCAACACC GACGCCTCTG CCCTCGCCTA CGCGTATCTC
GGCATGGTTG TCGGCCCTTG CTTCGGCGAC TACGCCACCG CGCTCCAATT TGGCGACCTC
GGGCTACGGC TGGTCGAAAC CCGCGGCCTC AACCAATACA AGGCGCGCGT TCACCTGACC
TATGGCGCTC ACGTGCTGCC CTGGGCTCGC GCGCTCAACG AAGCGCAGCC TTATCTGCGC
CGGGCGTTCG AGGAAGCCAA CGAGACCGGC GATCTGACTT ATGCGGGGTT CTCGTCCTGC
ACGTTGATCA CCAATCGGCT GTCCGCTGGC GACCCGCTCG ACGAAGTCGA GCTCGAGGCA
GGCGCCCGCC TTGCGCTGAT GAAGCGAGCG AAATTCGGCT TGATCGTCTA CATCATCACC
ACGCAGCTCC AATTCCTGCG GTCGCTGCGC GGCGACACCG TGGCATTGGG CTCGCTCAGC
AGTGAGGGCT TTGACGAAGA GCAATTCGCC AGCGAGCTGG CGGCGAACCG CAGCCTGGAC
ATTGCGCTGT GCTGGTTCTG GATCCGCAAG ATGCAGGCGC TGTACTTCGC CGGTGATTAC
GTCGCGGCAT TCGCAGCGCT GCGCAAGGCA CAGCCGTTGC TGTGGAGCAC CGTCGGCCAT
CACGAATATT CGATCTACTA TTTCTATGTC GGCGTGATCA GCGCCGCCAA TATGGACTCT
GCCACGCCGC CGGCGCCGCA TGCCGAGCTG GCCGAACTCC TTGCCGACGC GCATCAACAG
ATGGCCACCT GGGAAGTCCA TAATCCCGAA AACTACAGAG GAGCGCGGGC ACTGCTGGAA
GCCGAGATCG CGCGGCTGCA GCACCGCCCG TTCGAGGCGC TGCGGATGTA TCAGCAGGCG
ATCTCGTCGT CGCACCGCGG CCGGGTCTCG CAGGTCGAAG CCATCGCCCA TGAACTCGCC
GCCTGCTTCT GCCGCCAGCA GGGACTCGAC ACCGCCTACC ACGCCCATCT CGCCAAGGCG
CGCGACGGCT ATCAGCAATG GGGCGCTTTC GCCAAGGCCG CCCAAATCGA TCGCCTTTAT
CCGGACCTCG CGGCCGCGCT TTCGGCATCG GCTCAGGTTC CTTCCAGCAT TGCCGAGAGT
TTCGATCTCG CCGCCGTGCT GCGCACCTCT GAGGCCGTCT CCAACGAATC CGGCGTACCG
CGGCTGATGG AAACGCTGAT GACGTTGGTG CTCGAACACG CCGGGGCGCA GCGTGGGCTC
CTGATCCTGC CGCAGGACGA CGATCTATCG ATCCGCGCAG AAGCCAGGAC CGCTGAAGCC
GGGACCGTGG TCGTGCTGCG CGACGACATC GCATCGACCG ATGAGGTGCC CCGGTCGATC
GTCAACCTCG TCGCCCGCAC CGGTGAGGCA ATCACGATCG ACGACGCTCT TGGCAGCCGA
TTTGCAGCTG ACCCCTATGT GGCCCGGCTG AAAGCGCGGT CAATCCTGTG CCTCCCGCTG
ATGAAGCGCA GCAAGCTGAT CGGCATCATC TTTCTGGAGA ATAACCTAAC CGCCGGTGTG
TTCACGCCCG GCAAGCTGTC GGTGCTCAAG CTGCTGTCGT CGCAGGCGGC GATGTCCCTT
AAGAACGCCT TCCTCGAAGA GAAGGACGCG CTGGTCGACG CCCTGCAGAA ATCGCAGTCC
GAACTGATGC GGATGTCGCG CCTGACCGCG ATCGGCGAAT TGGTGATCTC GATCGCTCAT
GAGATCAATC AGCCGCTCAC CGCCATCATC ACCAATGCCG ACGTCTGTCT GCGCTGGCTC
AACAACGAAC AGCCGTCAAT CGCCGAGGCC AAGAATGCCG CAAGCCGAGT GATCGAAAAC
GGCCGCCGTG CCGCAAACGT GGTTCAGACC ATCCGCGGGT TGGCCGTGAA ATCGACGCCC
CAAATGGCGC CGGTCGATAT CAACGAGGTG GCGCGGGAAA TCCTGTCGAT CATCCAGAGC
GAGCTGCGCC ACCACAGCAT CCATCTCGAA ACCCGGCTGG ATAGCGGCGA TGCTGTTGTT
CTCGGCAACA AGGTTCAGCT CCAGCAGGTG CTGCTCAATC TGACGATGAA CGCGGTCGAG
TCGATGGCGA CGATCGAAGG CCGCCGAGTG CTGACGGTCG CCAGTGACAC CAACGACCCG
GGCAGCGTCA CTGTCAGCGT CACGGATAAC GGCTTCGGCT TCGACGAGGA TCGAATCGAT
CAGTTGTTCG AGGCGCTGGT GACGACGAAG CCGCAAGGCA TGGGCATGGG CTTGTCGATC
AGCAAGTCGA TCATCGACGC CCATGGTGGC CGACTGCTTG CCACCTCGCT GAAGCCGCAC
GGCGCTCGCT TTCAGTTCAC GCTCCCGCGA TCGGCTTAA
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| Protein sequence | MAGSDWRAER HDWIGAVKQI DAPMELVRRE GGLSVFRRRA DGINPPSLVV LADLDDPPAA
QQLTREFALT RDLDADYVLR PRELVTIDGR TALIIDDHNA QPLSEKIGQP LPVARLLRWG
IGIAQALGHI HGKGLIHRNL SPDAVWIDPS DRVWLTCLAC ASRLNRERPD MFGTEIGSPT
YMSPEQTGRL NRSIDARSDL YVFGILLYQM LASGSLPFFA SSPGQWIHYH IARKPNPLPN
ASAATSAIER IALRLLEKSA DDRYQTAIGV ERDMRACLTA WETDGTTAAV NLTEHDAAGI
VRMPEKLYGR EGEINAILSA YHRAASTGTT EWVLISGYSG AGKSSVVSEL RKSLAPTNGW
FIAGKFDQYK RDIPFATLAQ AFRSLVRQIL GLDCGELDQW RTALQEAVGE HGELMVNLVP
DLALVIGEQL PLPDLPPQES KSLFEAVLAR FLAAIARAEH PLVLFLDDLQ WLDKATSEFL
VRLAQNIDTR HLLLVGAYRD NEVDDNHPLS CALAEIRHSV SHIEEIRLAS LSADDICALV
SDVLRAEPDH VAPLAALIHR KTGGNPFFAI QFFSSLVDEQ LVSFHLMHHE WIWNIDLIDE
KGFTDNVVDL MSRKLHRLPS RTRDVLQTFS TLGMSAEACL LAQLRDITAE DVHEALQDLV
ANELLLRTED DYLFVHDRVR EAAYRLIDPA DLPTEHLAIA RHLANSVPTS SDALFSIANH
YNLGAPLLSS RSEMVLAAGY NLKAGRAAKK AIAYSSARVY LAAALDLLGE HRWTEQPDLA
YEVEYQLAEC EFLTGSLTEA EERLRQLVSK ARGDVAIAAV VALQITLYTA MDRSDLAIEV
CLAYLRNVGI VWSRHPDRQE ASAEYQLLTQ RIGSLSIESL LDLPTSTDRS RSAALSVMTA
ALAPAFFTDL NLVCLLLSRM ANLSIQHGNT DASALAYAYL GMVVGPCFGD YATALQFGDL
GLRLVETRGL NQYKARVHLT YGAHVLPWAR ALNEAQPYLR RAFEEANETG DLTYAGFSSC
TLITNRLSAG DPLDEVELEA GARLALMKRA KFGLIVYIIT TQLQFLRSLR GDTVALGSLS
SEGFDEEQFA SELAANRSLD IALCWFWIRK MQALYFAGDY VAAFAALRKA QPLLWSTVGH
HEYSIYYFYV GVISAANMDS ATPPAPHAEL AELLADAHQQ MATWEVHNPE NYRGARALLE
AEIARLQHRP FEALRMYQQA ISSSHRGRVS QVEAIAHELA ACFCRQQGLD TAYHAHLAKA
RDGYQQWGAF AKAAQIDRLY PDLAAALSAS AQVPSSIAES FDLAAVLRTS EAVSNESGVP
RLMETLMTLV LEHAGAQRGL LILPQDDDLS IRAEARTAEA GTVVVLRDDI ASTDEVPRSI
VNLVARTGEA ITIDDALGSR FAADPYVARL KARSILCLPL MKRSKLIGII FLENNLTAGV
FTPGKLSVLK LLSSQAAMSL KNAFLEEKDA LVDALQKSQS ELMRMSRLTA IGELVISIAH
EINQPLTAII TNADVCLRWL NNEQPSIAEA KNAASRVIEN GRRAANVVQT IRGLAVKSTP
QMAPVDINEV AREILSIIQS ELRHHSIHLE TRLDSGDAVV LGNKVQLQQV LLNLTMNAVE
SMATIEGRRV LTVASDTNDP GSVTVSVTDN GFGFDEDRID QLFEALVTTK PQGMGMGLSI
SKSIIDAHGG RLLATSLKPH GARFQFTLPR SA
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