| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2389 |
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| Symbol | |
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| ID | 6410051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2573593 |
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| End bp | 2575242 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712268 |
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| Product | protein of unknown function DUF894 DitE |
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| Protein accession | YP_001991378 |
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| Protein GI | 192290773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTA TTGAAGGCGA CCAGCAGACG GCGGCTCCGC CACGCCCCTC GTCCTGGGCA
GCCTTTCACC ACATTGCCTT CACGGTGGTG TGGACGGCCA CCGTGGTGTC CAACGTCGGC
ACCTGGATGT TCAATGCTGC CTCCGGCTGG CTGATGACCA GCCTTGAGGC CGACCCGCTG
CAGGTCGCGC TGGTACAGGT CGCGTCCAAC CTGCCGATCT TCCTGTTCGC CATTCCGGCT
GGCGCGCTCG CCGATATCGT CGACAAGCGT AAGTTTCTGA TCGTCGTGCA GATCGTCCTG
ACCTTGTTTG CGAGCGCCAG CGCCGCGCTG GTCTGGTTCG GCCTGATGAC GCCGCCGCAG
CTGCTGCTGT TCACCTTCCT GCTCGGCGCC GGCGCCGCCT TTGCAGCCCC GGCATTTCAA
TCGATCGTGC CGGATCTGGT CCCGAAGCAG GACCTCGCCT CCGCGGTCGC CAGCAACGGC
GTCGGCATCA ACATCAGCCG GGCAATCGGT CCGGCGCTGG GCGGCGTCGC GATCGGCAGC
CTTGGCATCG CCGCGCCATT TTGGATCAAC GCGGTCAGCA ACCTTGCGGT GATTGCTGCG
CTGATCTGGT GGCGGCCGGC CAATTCGCGT AGCGGCAGCC TGCCGCCGGA GCGACTGATC
GAAGCGCTGG TCACCGGCAT CCGTCACGCC CGGCACAACA CCGAGTTGCG CGCGACGCTG
GTCCGAGCCG TGGCGTTCTT CTTCTTTGCC AGCGCCTATT GGGCGCTGCT GCCGCTGGTT
GCGCGATCGC GTATCGCCGG CGGCCCCGAG CTTTACGGCA TCCTGCTCGG CGCCGTCGGT
GCCGGTGCGA TCGGTGGGGC GCTCGTGTTG CCGAAGCTGA AGGCCACGCT CGGCCCGGAC
CGGCTGGTTG CCGCCGGCAC GCTCGGCACC GCGCTGTGCC TGGTGATGCT CGGCCTTGCC
CGACAGGTTG AACTCGCCGT GGCCGCGTGT CTGCTCGCCG GCATCTCGTG GATCGCTGTG
CTGGCGAGTT TGAACGTTTC GGTGCAGGTC GTGCTGCCGG ATTGGGTACG CGGACGCGGG
CTGGCGATGT TCGTCACCGT GTTCTTTGGC GCGATGACCG CAGGCAGTGC GCTGTGGGGC
CAGATCGCCT CGTCGTTCGG TCTGCCGATC GCGCATTTCG CCGCCGCGGC CGGCGCGGTG
CTCGGCATCG CGGCGACGTG GCGTTGGAAA CTGAAAGCAG GCGTAGACGT CGACCTGTCA
CCGTCGATGC ACTGGCCGAC ACCGATCGTC AGCATCGATG CCGAGCCCGA TCAGGGGCCA
GTGCTGATCA CGGTCGAGTA CCGGATCGCA AAGGGCCATC GCGACGCGTT TCTCTCCGCC
GTCCGGCATC TCAGCCGGCA GCGGCGGCGC GACGGCGCCT ATCAATGGGG CGTATTCGAG
GATGCGGCCG ATCCTGGCCG CTTTGTCGAG ACCTTCAAGG TCGCCTCATG GCTGGAGCAT
CTGCGCCAGC ACGAACGCGT CACCAACGCC GATCGGGTGC TGCAGGAGCA GATCCGCTTG
TGCGACGCCG AACCGAAAGT GACGCACCTG ATCGCCGCGC CACATGGGCA CGTCAAACGG
CAGCCGACGC ATGCGTCGCA AACGCCGTGA
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| Protein sequence | MSSIEGDQQT AAPPRPSSWA AFHHIAFTVV WTATVVSNVG TWMFNAASGW LMTSLEADPL
QVALVQVASN LPIFLFAIPA GALADIVDKR KFLIVVQIVL TLFASASAAL VWFGLMTPPQ
LLLFTFLLGA GAAFAAPAFQ SIVPDLVPKQ DLASAVASNG VGINISRAIG PALGGVAIGS
LGIAAPFWIN AVSNLAVIAA LIWWRPANSR SGSLPPERLI EALVTGIRHA RHNTELRATL
VRAVAFFFFA SAYWALLPLV ARSRIAGGPE LYGILLGAVG AGAIGGALVL PKLKATLGPD
RLVAAGTLGT ALCLVMLGLA RQVELAVAAC LLAGISWIAV LASLNVSVQV VLPDWVRGRG
LAMFVTVFFG AMTAGSALWG QIASSFGLPI AHFAAAAGAV LGIAATWRWK LKAGVDVDLS
PSMHWPTPIV SIDAEPDQGP VLITVEYRIA KGHRDAFLSA VRHLSRQRRR DGAYQWGVFE
DAADPGRFVE TFKVASWLEH LRQHERVTNA DRVLQEQIRL CDAEPKVTHL IAAPHGHVKR
QPTHASQTP
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