Gene Rpal_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2384 
Symbol 
ID6410046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2568419 
End bp2569483 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID642712263 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_001991373 
Protein GI192290768 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.880342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCGC CCTTGCTTGA ACCCCGTATC CTGTCCGTTC CGCCGGTCGA TCCCGCCCAT 
GAGCCAGAGC TGCGAGCCCG GCTCGACGGC AAAGCGAAGC CGCCGGGCTC TCTCGGCCGG 
CTCGAAGATC TCGCCGTGCA GCTCGGGCTG ATCTGGCACC CGGCGCCGCC GCGGGCCGAG 
CGTGCGTCGG TGTTCATCTT TGCCGGCGAC CACGGTCTCG CCGCCGACCG GGTCTCGCCG 
TATCCGGCGA GCGTGACCCG CTCGATGGTC GAAGCGTATC TGGCGGACTG CGCCGGCGTG 
AACGTTCTTG CGAAAGCGGC GGCGACCGAG GTGCGAATCG TCGACGGTGG CATCGATGCC 
GATATGCCGC CACACCCCAA ACTGATCGAT CGCAAGATCC GGCGCGGCAC GCGCAACGCC 
CGCCACGAAC CGGCAATGAC TCACCAGGAG GCCGCGCGTG CGATCACTGC GGCGGCCGAT 
CTGGTGCGTG AGGATATCGC AGGCGGGCTC GACATCGTCG CGATCGGGGA GATGGGAATC 
GGCAACACCA CTTCTGCCGC GCTGATCACT CACGCGCTGA CAGCGGCGCC TATCTTCGAT 
TGCGTCGGCC GCGGCGCCGG GATGGATGAT GCCGGCGTCG CGCACAAGCG CGCTATCGTC 
GAACAGGCGG CGGCGCGGGC GCAACCGACG GCGCCGCTCG ACGTGCTGGC CGAGTTCGGC 
GGCTTCGATA TCGCGATGAT GGCTGGCGCA GTGCTCGGCG CCGCAGCTTC GCGGCGGCCG 
GTGGTGATCG ATGGTTTCAT CGCCAGCGCG GCGGCGCTGC TCGCGGTGCG GCTGCAGCCC 
GCCGCGCGCG ATTACTGCGT GTTCTCGCAT CGCTCGGCCG AGCGCGGCCA CCGCGTGCTG 
CTCGAAGCGA TGCAGGCGAC GCCATATCTC GATCTAGGCT TGCGGCTCGG CGAGGGCACC 
GGTGCGCTGA TGACCGTTCC GCTGCTACGC GCCGCCGCAG GCATCCTCAA CGATCTCGCC 
GCGCTTTCGG ACGTGCTGGC GGGCCGGATC GGACCCTGCG CGTGA
 
Protein sequence
MHAPLLEPRI LSVPPVDPAH EPELRARLDG KAKPPGSLGR LEDLAVQLGL IWHPAPPRAE 
RASVFIFAGD HGLAADRVSP YPASVTRSMV EAYLADCAGV NVLAKAAATE VRIVDGGIDA 
DMPPHPKLID RKIRRGTRNA RHEPAMTHQE AARAITAAAD LVREDIAGGL DIVAIGEMGI 
GNTTSAALIT HALTAAPIFD CVGRGAGMDD AGVAHKRAIV EQAAARAQPT APLDVLAEFG 
GFDIAMMAGA VLGAAASRRP VVIDGFIASA AALLAVRLQP AARDYCVFSH RSAERGHRVL 
LEAMQATPYL DLGLRLGEGT GALMTVPLLR AAAGILNDLA ALSDVLAGRI GPCA