Gene Rpal_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2376 
Symbol 
ID6410038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2560384 
End bp2561607 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID642712255 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_001991365 
Protein GI192290760 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTA GCGATGACAC AGCGCAGCCC TGGCTGTCCA TCGTCGGAAT CGGCGAGGAC 
GGTCTCGACG GGATATCGGC CCGCGCGCGG GCACTCCTGG ACGCAGCCGA GCTGGTCGTT 
GGCGGTGATC GCCACCTCGC CCTCGTCGCC GCTCTGCACA AGCCCTCCTT GCCGTGGCGC 
GTGCCGTTCG CAGCCTCGTT GCCCAACGTG TTGGCGCGGC GCGGCCGCCG CGTCGTCGTG 
CTGTGCTCCG GCGACCCGTT CTGGCACGGC GCCGGCGCGG TGCTGGCCGA TCACCTCGCG 
GCGAACGAAT GGACCGCGGT CCCGGCGCCA TCGACCTTTG CTTGGGCGGC GGCGCGGATC 
GGCTGGCGCC TGGAAGACAC AGCGACGCTC GGCCTGCATG CACGGCCGGT TGCAACGCTG 
CGCCCGCATC TCCGTCCCCA GGCGCGGCTG ATCGTGCTGG TGCGCGATGG TGCAGCCGTG 
GTCGAAATCG CCGCGTATCT GGCGGCGAAT GGCTTCGGCG CATCCGAGCT CACCGTGCTC 
GAAGCGCTCG GCGGCCCGCG CGAGCGCGTG CGGCGGACCA CCGCGTCGAT CTTCGCCTTC 
CCCGACGTCA CCGCGCCGGT CGCACTCGGC ATCGCCGTCG TTGCAGAGCC AAATGCCATC 
ATTATGCCGT GCATCAGCGG CCTGCCGGAT GAGCTGTTTC AGCACGACGG CCAGCTCACC 
AAGCGCGAGA TCCGCGCCGT CACGCTGTCG ACGCTGGCGC CGCGCGGACA TGAGCTGCTC 
TGGGACATAG GCGCCGGTGC CGGCTCGATC GGGATCGAAT GGCTGCTGGC GGCGCGCAGC 
AATCACGCGA TCGGGATCGA GACGCGGCCC GACCGGCTCG CCACCGCGCG CGCCAATGCC 
GAGGCGCTCG GCGTGCCACA ATTCGATCTG CGGCTCGGCT CGGCGCCCGA CGCGCTCGCC 
GGACTGCCCA CGCCGAACGC GGTGTTCATC GGCGGCGGCG CCGGTCGTCC AGGCGTGATG 
GATGCAGTGT GGCAGGCGCT GCCCGCCGGC GGCCGGCTGG TCGTGAATGC GGTGACGCTG 
GAGACCGAAG CGCTGCTGAT CGACTGGCAT CACCGCCACG GCGGCGAGCT GCTGCGGCTC 
GGCGTCGAGC GCGCCTCCCC GGTCGGCGGC CTCACCGGAT GGCGCGCGGC GATGCCGGTG 
GTGCAATGGA GCGTCCACAA ATGA
 
Protein sequence
MISSDDTAQP WLSIVGIGED GLDGISARAR ALLDAAELVV GGDRHLALVA ALHKPSLPWR 
VPFAASLPNV LARRGRRVVV LCSGDPFWHG AGAVLADHLA ANEWTAVPAP STFAWAAARI 
GWRLEDTATL GLHARPVATL RPHLRPQARL IVLVRDGAAV VEIAAYLAAN GFGASELTVL 
EALGGPRERV RRTTASIFAF PDVTAPVALG IAVVAEPNAI IMPCISGLPD ELFQHDGQLT 
KREIRAVTLS TLAPRGHELL WDIGAGAGSI GIEWLLAARS NHAIGIETRP DRLATARANA 
EALGVPQFDL RLGSAPDALA GLPTPNAVFI GGGAGRPGVM DAVWQALPAG GRLVVNAVTL 
ETEALLIDWH HRHGGELLRL GVERASPVGG LTGWRAAMPV VQWSVHK