| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2362 |
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| Symbol | |
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| ID | 6410024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2548525 |
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| End bp | 2549385 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712242 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001991352 |
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| Protein GI | 192290747 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.453828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA CATATCCGGA GCCGCCCTAC CCGAGCCAGC GCCAATCCAT GCCGGGCTCG
ACGGACAAGA TGACGCCGCG TCCCGATCAT GGCGAGCACA GCTACAAGGG CTCCGGCAAG
TTGACCGGAA AGGTCGCGAT CATCACCGGC GGCGACAGCG GCATCGGACG TGCGGTCGCG
ATCGCCTACG CCCGTGAAGG CGCCGACCTG CTGATCGCCT ATCTGAGCGA GGATGACGAC
GCCCGGCAGG TCAAGGAGCT GGTCGAGGCA GAAGGCCGCA AGGCAGTGCT GGTCGCCGGC
GATATCTCCC AGCCGCATCA TTGCCGCAAG GTGGTCGACC ACGCCGTCGA GGAATTCGGC
CGGATCGACA TCCTGGTCAA CAACGCCGCG CATCAGGCGA CCTTCAAGGA TATCGGCGAC
ATCAGCGACG AGGAGTGGCA GACGACGTTC GCCGTCAACA TCCACGCGAT GTTCTATCTG
ACCAAGGCCG CGGTGCCGCA CATGAAGCCG GGCAGCGCGA TCATCAACAC GGCCTCGGTC
AATTCCGACA TGCCCAACCC GATGCTGCTC GCCTATGCAA CGACCAAGGG TGCGATCCAG
AACTTCACCG GCGGCTTGGC GCAGATGCTC GCCAGCAAAG GCATCCGCGC CAATGCGGTC
GCGCCCGGCC CGATCTGGAC GCCGCTCATT CCCTCGACGA TGCCGGATGA CGCGGTGAAG
AACTTCGGCA AGCAGGTTCC GCTGGGCCGC GCCGGCCAGC CCGCGGAGCT TGCCACCGCC
TATGTGATGC TGGCCGATCC GCTGTCGAGC TACACGTCCG GCACGACGGT CGCGGTCACC
GGCGGCAAAC CGTTCATCTG A
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| Protein sequence | MTQTYPEPPY PSQRQSMPGS TDKMTPRPDH GEHSYKGSGK LTGKVAIITG GDSGIGRAVA
IAYAREGADL LIAYLSEDDD ARQVKELVEA EGRKAVLVAG DISQPHHCRK VVDHAVEEFG
RIDILVNNAA HQATFKDIGD ISDEEWQTTF AVNIHAMFYL TKAAVPHMKP GSAIINTASV
NSDMPNPMLL AYATTKGAIQ NFTGGLAQML ASKGIRANAV APGPIWTPLI PSTMPDDAVK
NFGKQVPLGR AGQPAELATA YVMLADPLSS YTSGTTVAVT GGKPFI
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