| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2346 |
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| Symbol | |
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| ID | 6410008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2531405 |
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| End bp | 2534620 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712226 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001991336 |
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| Protein GI | 192290731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.752496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACA AGGTGCTCGC CTTCTCCGTT CGCCAGCGTT GGCTGGTCAT GATCGGCGCG
CTGATGATGG CCGCGTTCGG CGCGTGGAAC TTCACCCGCC TGCCGATCGA CGCGGTTCCG
GACATCACCA ACGTCCAGGT CCAGATCAAC ACCAATGCAC CCGGCTATTC GCCGCTCGAG
GTCGAGCAAC GGATCACGTT CCCGATCGAG ACCGCGATGG GCGGGCTGCC GAACCTCCTC
AATACGCGGT CTCTGTCGCG CTACGGGCTG AGCCAGGTCA CCGTGGTGTT CAAGGACGGC
ACCGACATCT ACTTCGCCCG GCAACTCGTC AATGAGCGCG TGCAGCGCGC GAAGGACGCG
CTACCGACCG GAATCGAGAC CGCGATGGGA CCGGTCTCGA CCGGGCTCGG CGAAATCTAC
ATGTACACCG TGGAGGCCAA GCAGGGGGCG ACGCGCGCCG ACGGCAAGCC GTTCACGCCC
AGCGACCTGC GCACCGCGCA GGACTGGATC ATCAAGCCGC AACTGCGCAA TGTCCCAGGC
ATCAACGAGG TCAATACCAT CGGCGGCTTC GCCAAGCAGT TCCACGTGCT GCCCGATCCG
GCGAAGCTGA TGGCCTACCG CCTCAGCTTC CGCGATGTGA TGACGTCGCT CGCCGCCAAC
AACGCCAATG TCGGCGCCGG CTACATCGAG AAGAACGGCG AGCAGTATCT GGTACGCACG
CCAGGGCAGG TCAGCGACGT CGAGGAGATC CGGCAGATCG TGATCGGCTC GCGCAGCGGC
GTGCCTGTGC GGATCGTGGA CGTTGCGGAG GTGAAGGAAG GCACCGATTT GCGCACCGGC
GCCGCGACCC TGAATGGCCA GGAGGTCGTG CTCGGCACCG CGATGCTGCT CATTGGTGAA
AACGGCCGCA CCGTGGCACA GCGGGTTGCC GCGAAGCTGC AGCAAATCGA GAAGTCTTTG
CCGGAAGGCA TGTCGCTGCG CGCGGTTTAC GACCGCACCC ACCTGATCGA CGCCACCATC
GCGACGGTGG AGAAAAATCT GGTCGAAGGC GCGCTCTTGG TGATCGCGGT CCTGTTCCTG
ATCCTCGGCA ATTTCAAAGC GGCGTTCGCC ACCGCGCTGG TGATCCTGCT GGCGATGCTA
TTCACCATCA CCGGGATGTT CGAGAACAAG GTTAGCGCCA ATCTCATGAG TCTGGGCGCA
ATCGACTTCG GTATTATCAT CGACGGTGCT GTGATCATCG TCGAGAACTG CCTGCGGCTG
CTGGCGCATG AGCAGAAGCT GCGAGGACGG TTGCTGACCC GTCAGGAGCG GTTCGACACC
ATCATCGCCG GCTCGCGCGA GGTGATCAAA CCGAGCCTGT TCGGTACGCT GATCATCGCG
GTGGTGTATC TGCCGGTGCT GACGCTGACC GGCGTCGAAG GCAAGATGTT CACGCCGATG
GCGCTGACCG TGCTGATGGC GTTGCTCGGC GCCAGCCTGC TGTCGATGAC GTTCGTGCCC
GCCGCGGTGG CGCTGCTGGT CACCGGCAAG GTGTCGGAGA AAGAGAACTG GTTCATGCGG
CTGGCGCACC GGGCGTATCT GCCGCTGCTC GATCTGGCGA TCCGGCTGCG AAGGGTCGTC
GTCGTGGTTG CGGTGGCGCT GGTCGTGGTG AGCGGCTATG CGGCGACGCG GATGGGCGGC
GAGTTCATTC CGAGCCTCGA CGAAGGTGAC GTCGCGATCC AGGCGATGCG CATTCCGGGG
ACCAGCCTGA CACAATCGCT GGACATGCAG ATTGCGCTGG AAAAACGCAT CCTGGCGATC
CCGGAGGTGA AGGACGTGTT CGCCCGCACC GGCACCGCTG AGGTTGCGAC CGATCCGATG
CCGCCGTCGA TCTCCGACGG TTACGTGATG CTGAAGCCGC GTGAGCAGTG GCCAGATCCG
AAGAAGCCCA AGGCCGAGGT CGTCGAGCAG ATCGAATTGG CGGCCGAGCA GGTGGCGGGC
AGCCTGTACG AGCTGTCGCA ACCGATCCAG TTGCGCTTCA ACGAACTGAT TTCCGGCGTG
CGCAGCGACG TGGGCGTGAA GATCTTCGGC GACGATCTCG ACATGCTGAC CCAGGTCGCG
GGTCAGGTGC AGTCGGTGCT GCAGACCATC AGGGGGGCGG CCGACGTCAA GGCCGAGCAG
GTCGCCGGGC TGCCGGTACT GACGGTGAAG CTCGACCGCA AGGCGCTGGC GCGGTTCGGC
ATCAGCGTCG CTGAGGTGCA AAACCTCGTT GAGATCGCGG TCGGCGGCAA ATCGGCCGGG
CTTGTATTCG AAGGCGACCG CCGCTTCGAC CTTGTTGTCC GGCTGCCGGA TGAGATCCGC
ACCAATATCG AGGCGATCAA GGCGCTGCCG ATCCCACTGC CTCCGGCCGA GGGGCAGGCG
AAACCGACAC CGGCTGCGTT CGGCACCTCG CCGCTGTCCC AGATGCGCTA CGCGCCGCTG
TCCGAGCTTG CCGAGATCGT GGTGGCGCCG GGGCCGAACC AGATCAGCCG TGAAGACGGC
AAGCGTCGTA TCGTGGTCTC CGCCAACGTC CGAGGCCGTG ACCTCGGTTC GTTCGTCGGC
GAGGCGCAGC AACTGATTGC CGACAAGGTC AAGCTGCCCG CGGGCTATTG GATCGGCTGG
GGCGGGCAGT TCGAGCAGCT CGTCTCGGCA ACCCAGCGCC TGACCATCGT GGTGCCGATC
GCGCTGTTGC TGATCCTCCT GCTGCTGTTC ATCAGCTTGG GCTCGGCAGC GGATGCGCTG
CTGGTGTTCA GCGGCGTGCC GCTGGCGCTC ACCGGCGGCG TCTTCGCGCT GCTGCTGCGC
GACATTCCGC TGTCGATCAG CGCCGGCATT GGCTTCATCG CGCTGTCCGG CGTCGCGGTG
CTGAACGGCC TTGTGATCAT CACCTTCATC GAACGGCTGC GCGGCGAAGG ACGCAAGATC
GTCGAGGCGG TGCGCGAAGG CGCGCTGACG CGCTTGCGCC CTGTGATGAT GACCGCGCTG
GTGGCTTCGC TTGGCTTCGT GCCGATGGCG CTCGCCACCG GCGCCGGCGC CGAGGTGCAG
CGACCGCTGG CTACCGTGGT GATCGGCGGG ATCGTGTCGT CGACCATGCT GACGTTGCTG
GTGCTGCCGG CGCTCTACAT CCTGTTCCGC CGTGAAATTG CAACTGCGGG CACCGACGCG
ACGAATGTCC CTGCCACTGA AGGAGACCAC CGATGA
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| Protein sequence | MIDKVLAFSV RQRWLVMIGA LMMAAFGAWN FTRLPIDAVP DITNVQVQIN TNAPGYSPLE
VEQRITFPIE TAMGGLPNLL NTRSLSRYGL SQVTVVFKDG TDIYFARQLV NERVQRAKDA
LPTGIETAMG PVSTGLGEIY MYTVEAKQGA TRADGKPFTP SDLRTAQDWI IKPQLRNVPG
INEVNTIGGF AKQFHVLPDP AKLMAYRLSF RDVMTSLAAN NANVGAGYIE KNGEQYLVRT
PGQVSDVEEI RQIVIGSRSG VPVRIVDVAE VKEGTDLRTG AATLNGQEVV LGTAMLLIGE
NGRTVAQRVA AKLQQIEKSL PEGMSLRAVY DRTHLIDATI ATVEKNLVEG ALLVIAVLFL
ILGNFKAAFA TALVILLAML FTITGMFENK VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAHEQKLRGR LLTRQERFDT IIAGSREVIK PSLFGTLIIA VVYLPVLTLT GVEGKMFTPM
ALTVLMALLG ASLLSMTFVP AAVALLVTGK VSEKENWFMR LAHRAYLPLL DLAIRLRRVV
VVVAVALVVV SGYAATRMGG EFIPSLDEGD VAIQAMRIPG TSLTQSLDMQ IALEKRILAI
PEVKDVFART GTAEVATDPM PPSISDGYVM LKPREQWPDP KKPKAEVVEQ IELAAEQVAG
SLYELSQPIQ LRFNELISGV RSDVGVKIFG DDLDMLTQVA GQVQSVLQTI RGAADVKAEQ
VAGLPVLTVK LDRKALARFG ISVAEVQNLV EIAVGGKSAG LVFEGDRRFD LVVRLPDEIR
TNIEAIKALP IPLPPAEGQA KPTPAAFGTS PLSQMRYAPL SELAEIVVAP GPNQISREDG
KRRIVVSANV RGRDLGSFVG EAQQLIADKV KLPAGYWIGW GGQFEQLVSA TQRLTIVVPI
ALLLILLLLF ISLGSAADAL LVFSGVPLAL TGGVFALLLR DIPLSISAGI GFIALSGVAV
LNGLVIITFI ERLRGEGRKI VEAVREGALT RLRPVMMTAL VASLGFVPMA LATGAGAEVQ
RPLATVVIGG IVSSTMLTLL VLPALYILFR REIATAGTDA TNVPATEGDH R
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