Gene Rpal_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2342 
Symbol 
ID6410004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2528034 
End bp2528576 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content65% 
IMG OID642712222 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001991332 
Protein GI192290727 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGCCG CTTCGCCGAT CCTGATCCGC TCCTCGCACG ACGGCGACGT CGAGGCGATG 
CTCGACATCT ATCGCTACTA CATCCGGCGC GGCCTCGATG AGGGGATCGA CGACCACGGA
ACGCCGCAGC CGGACGATCT GAAAGAGCGG CGCAAGAACT TGCGCAACCG TCGCTTCCCG
CATCTGGTGG CGATCCGTGG TGAGACGGTT GTCGGCTACG CCTATGTGGT GCTGTTCCGG
AAGCGGCCAG CCTATCGCTA CACCGTCAAA CACTCGATCT ATGTGCATCC GGATCACCTC
GGCAGCGGCA TCGGCCGGCT GTTGATGCGC GAGCTGATCG ACGCATGCGC CGCGGCGGGC
TTCCGGCAAA TGATCGGCTA TATCGACGCC GACAACGCCG CTTCGCTCGG TCTGCATCAC
GGCTTCGGCT TTGCCACGGT GGGGCGGCTG CCGGGCGTTG CCTATCGCTA CGGCCGCTGG
GCCGATACGG TGATGGTGCA GCGATCGCTC GGTGCGGGTG CGACCACGCC TCCTGTGGTG
TGA
 
Protein sequence
MDAASPILIR SSHDGDVEAM LDIYRYYIRR GLDEGIDDHG TPQPDDLKER RKNLRNRRFP 
HLVAIRGETV VGYAYVVLFR KRPAYRYTVK HSIYVHPDHL GSGIGRLLMR ELIDACAAAG
FRQMIGYIDA DNAASLGLHH GFGFATVGRL PGVAYRYGRW ADTVMVQRSL GAGATTPPVV