| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2300 |
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| Symbol | |
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| ID | 6409961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2490523 |
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| End bp | 2493735 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642712182 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_001991293 |
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| Protein GI | 192290688 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGA AGCTGCTCGC ATTTTCGGTC CGCCAGCGCT GGTTAGTGAT GATCGGTGTA
CTGATGATGG CAGCGTTCGG TGCATGGAAT TTCACGCGCC TGCCGATCGA CGCCGTGCCG
GATATCACGA ACGTCCAGGT CCAGATCAAC ACCAACGCGC CGGGTTATTC GCCGCTTGAG
GTCGAGCAGC GGATAACATT TCCAATCGAA ACCGCCATGG GCGGGCTGCC GAACCTCGTC
AACACCCGGT CGCTTTCGCG CTACGGGCTA AGCCAGGTGA CGGTGGTGTT CAAGGATGGC
ACCGACATCT ACTTTGCCCG CCAATTGGTG AATGAACGCG TCCAGCGAGT GAAGGATATT
TTGCCGGTAG GTATTGAGAC CGCCATGGGG CCAGTCTCAA CCGGCCTTGG CGAAATCTAC
ATGTACACGG TGGAGGCGAA GGAGGGGGGC AAAAGCGCCG AGGGCAAGCC ATACACGCCG
AGTGATCTGC GCACCGCGCA GGACTGGATC ATCAAGCCGC AATTGCGCAA CGTCGCCGGC
GTCAACGAGG TCAACACCAT TGGAGGCTTC GAAAAGCAAT TCCACGTCCT TCCCGATCCC
GCGAGGTTGA TGGCGTATCG CCTGAGCTTC CGCGACGTCA TGACGTCGCT CGCGAGCAAC
AACGCGAACG TGGGTGCCGG CTACATTGAA AAGAACGGCG AGCAATACCT GGTAAGGACG
CCGGGGCAGG TCGCAAACGT CGAAGACATC AGGCAGATCG TAATTGGATC GCGTAACGGC
GTCCCGGTCC GCATTATGGA CGTCGCCGAG GTCAAAGAAG GCACTGACCT GCGCACCGGC
GCAGCGACGG TGAGCGGCAA GGAGGTGGTG CTGGGGACGG CGATGCTGCT GATAGGCGAG
AACGGGCGCA CCGTTGCGCA GCGGGTCGCG GCGAAACTCG AGCAAATTCA GAAGTCGCTG
CCCGAAGGGA TCTCGCTGCG CGCGATCTAC GATCGAACCC ATCTAATCGA TGCCACGATC
GCGACCGTCG AGAAGAACTT GATCGAAGGG GCGCTGCTGG TCATCGCAAT TCTGTTCCTG
ATCCTCGGCA ACATCAAGGC GGCGTTCGCT ACCGCGCTTG TCATCCCGCT GTCGATGCTA
TTCACGATCA CGGGAATGTT CGAGAACAAG GTCAGCGCCA ACCTGATGAG CCTGGGCGCA
ATCGATTTCG GCATCATTAT CGACGGCGCG GTCATCATCG TCGAAAACTG TCTGCGGCTG
CTTGCCCATG AGCAGCAGCG GCGCGGCCGT CTGCTCACCC GCGAAGAGCG GTTCGAGACG
ATCATCGCAG GCGCCCGTGA AGTCATCAAG CCGAGCCTGT TCGGTACTCT GATCATCGCA
GTGGTTTACC TGCCGGTGCT GACGCTGACC GGTGTCGAAG GCAAGATGTT CACGCCCATG
GCTTTGACGG TGCTGATGGC ATTGCTCGGC GCTAGTTTGT TGTCGATGAC CTTTGTTCCG
GCCGCGGTCG CGTTGATGGT TACTGGCAAG GTCTCTGAAA AGGAAAATTG GTTCATGCGC
CTCGCGCATC GGACCTACGT GCCACTGCTC GATTTGGCGG TCCGTCTTCG CGTCGTCGTG
GCTGCGGCGG CCGTTCTTCT CGTCATCGTC AGCGGCTACG CCGCCACGCG GATGGGTGGC
GAATTCATAC CCAGCCTCGA CGAAGGTGAC GTGGCTATAC AGGCCATGCG CATCCCCGGA
ACCAGTCTCA CCCAATCTCT TGAAATGCAG ATGGCGCTGG AAAAGCGGCT ACTGGCGATT
CCCGAGGTGA AGGAAGCCTT CGCACGAACG GGTACCGCTG AAGTCGCAAC GGACCCGATG
CCTCCATCGA TCTCCGACGG CTACGTGATG CTGAAGCCGC GCGATCAGTG GCCTGATCCG
AAGAAGCCAA AGCTCGAGGT AATGAAGGAG ATCGAGACGG CTTCCGAGGA GGTGGCGGGC
AGCCTCTACG AGCTGTCGCA GCCAATCCAG CTTCGCTTCA ATGAGCTGAT TTCCGGCGTT
CGCAGCGACG TTGGCGTCAA GATATTTGGT GACGATCTCG ATGTCTTGGC GCAGGTAGCG
GCGCAGGTGC AGGCTATACT TCAGACCATC AAGGGAGCTG CCGATGTCAA GACCGAGCAG
GTCGCGGGCC TGCCCGTTCT TACTGTGAAG CTTGATCGGC AGGCGCTGGC GCGTTTCGGC
ATTAACGTTG CCGATGTTCA GAGCCTGGTT GAGATCGCGG TCGGCGGCAA GTCTGCCGGG
TTGGTGTTCG AAGGCGACCG CCGCTTCGAC TTGGTTGTTC GGCTCCCTGA TCATCTCCGG
ACTGACGTGG AGGCGATCAA GAGGTTGCCG ATTCCGCTGC CACCGGCGGA TGGGCAGGCG
AAGGCTACTC CGGCCGTTTT CGGTAACTCA CCACTGGCCC AGATGCGCTA TGCGCCGCTG
GCGGAGCTCG CCGAAATTTC AGTCTCGCCT GGGCCGAACC AGATTAGTCG CGAGGATGGC
AAACGGCGCA TCGTGGTGTC TGCCAACGTT CGTGGCCGCG ACCTCGGCTC TTTTGTTGGC
GAGGCCCAGC AACTGGTCGC AGGTAAGGTG AAGCTGCCGG CGGGCTATTG GATCGGGTGG
GGCGGCCAGT TCGAGCAGCT CGTCTCGGCG ACCGAGCGCT TGACCATCGT GGTTCCAATC
GCGCTGCTGC TGATCTTCTT GCTGCTGTTC ATCAGCCTTG GTTCGGCGGC CGATGCCCTT
TTGGTATTCA GCGGAGTACC GCTGGCGCTA ACCGGGGGCA TTTTCGCGCT CCTGTTGCGA
GGCATCCCGC TTTCGATCAG TGCCGGAATC GGCTTCATCG CCCTTTCGGG GGTTGCCGTG
CTCAACGGTC TTGTCATCAT TACCTTCATT GAGCGTTTGC GTGGCGATGG ACGTAAGATC
GTCGATGCCG TTCGTGAGGG CGCGCTAACC CGCCTGCGAC CGGTGCTGAT GACCGCGTTA
GTCGCCTCTC TTGGTTTTGT ACCAATGGCA CTTGCCACCG GCGCTGGCGC TGAGGTGCAA
CGGCCGCTGG CCACTGTGGT GATCGGCGGC ATCGTGTCGT CGACTATCCT CACGCTTCTC
GTCCTTCCGG CGCTCTACAT CCTGTTCCGC CGCGAAGCCT CGCCAGCCGA GTTGGCGGCC
AGTTCTGTTC CTACAAAACA AGGAGATCGT TGA
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| Protein sequence | MIEKLLAFSV RQRWLVMIGV LMMAAFGAWN FTRLPIDAVP DITNVQVQIN TNAPGYSPLE
VEQRITFPIE TAMGGLPNLV NTRSLSRYGL SQVTVVFKDG TDIYFARQLV NERVQRVKDI
LPVGIETAMG PVSTGLGEIY MYTVEAKEGG KSAEGKPYTP SDLRTAQDWI IKPQLRNVAG
VNEVNTIGGF EKQFHVLPDP ARLMAYRLSF RDVMTSLASN NANVGAGYIE KNGEQYLVRT
PGQVANVEDI RQIVIGSRNG VPVRIMDVAE VKEGTDLRTG AATVSGKEVV LGTAMLLIGE
NGRTVAQRVA AKLEQIQKSL PEGISLRAIY DRTHLIDATI ATVEKNLIEG ALLVIAILFL
ILGNIKAAFA TALVIPLSML FTITGMFENK VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAHEQQRRGR LLTREERFET IIAGAREVIK PSLFGTLIIA VVYLPVLTLT GVEGKMFTPM
ALTVLMALLG ASLLSMTFVP AAVALMVTGK VSEKENWFMR LAHRTYVPLL DLAVRLRVVV
AAAAVLLVIV SGYAATRMGG EFIPSLDEGD VAIQAMRIPG TSLTQSLEMQ MALEKRLLAI
PEVKEAFART GTAEVATDPM PPSISDGYVM LKPRDQWPDP KKPKLEVMKE IETASEEVAG
SLYELSQPIQ LRFNELISGV RSDVGVKIFG DDLDVLAQVA AQVQAILQTI KGAADVKTEQ
VAGLPVLTVK LDRQALARFG INVADVQSLV EIAVGGKSAG LVFEGDRRFD LVVRLPDHLR
TDVEAIKRLP IPLPPADGQA KATPAVFGNS PLAQMRYAPL AELAEISVSP GPNQISREDG
KRRIVVSANV RGRDLGSFVG EAQQLVAGKV KLPAGYWIGW GGQFEQLVSA TERLTIVVPI
ALLLIFLLLF ISLGSAADAL LVFSGVPLAL TGGIFALLLR GIPLSISAGI GFIALSGVAV
LNGLVIITFI ERLRGDGRKI VDAVREGALT RLRPVLMTAL VASLGFVPMA LATGAGAEVQ
RPLATVVIGG IVSSTILTLL VLPALYILFR REASPAELAA SSVPTKQGDR
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