| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2299 |
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| Symbol | |
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| ID | 6409960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2489473 |
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| End bp | 2490465 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642712181 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991292 |
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| Protein GI | 192290687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA TCGTTCTCTC GCTTTTGACC GCGGTGGCGG TCCTGGCTTT CGGCCTGGCG
ATCTATTCGT ATGTTCCGTT CAATTCCAGT GATCCAATCG CCCAATCTGC GAAAGACTCC
AAGTCGGAAA AGGGCGGTGG TGGAAAAGCT GACGGAGAAG GGGCGCACGA GGAAGAGGGC
GCAGTCGAGA TGAGCGACGC CAGGGTCGCT TCCTCGGGCA TAGAGATAGC TGTTGCAGGA
CCGGCCACGT TGCACGATTC ACTGATCCTA AACGGCATTT TGCAGCCCAA TCAGGAGACG
CTGGTTCAGG TGACACCTCG CTTTCCGGGC ATCGTCCGGG AGATCCGACG ACGCATTGGC
GACAAGGTAG AGAACGGAGA TCTCCTCGCT AAGATCGAGA GTAACCAGAG TCTCACCGTA
TATGAAGTGC GCGCGCCGAT CGCCGGCACT GTGATCGACC GGCAGATCTC GCTCGGTGAG
TACGCCTCCG AGCAGAAGCC GGCTTTCACC GTCGCCGACG TTTCGACAGT TTGGGTTGAT
CTTTCGGTCT ATCGTCGGGA CCTCCCGCGG GTTCGCATCG GCGACAAGAT CCTGATCGAT
GTCGGTGACG ACGGTAAGCC AGTCGAGGCG AGCCTTTCTT ACATCTCGCC CGTCGGTAGC
AGCGACACCC AGAGCGCTCT TGCCCGAGCA ATTGTTCCTA ACACGGACAT GCGTCTACGC
ACCGGTCTGT TCGTCTCTGC TCGACTGATC CTGGCCGCCC GCCAGGTACC GTTGGCGGTC
AGGACGTCGG CCGTCCAGAC CATCGAGAAC CGCAATGTCG TGTTCGTTCG GAAAGGCGAC
AAGTTCGAGG TCCGCGACGT CGAACTAGGC GCGCGTGATT CCGAAAACGT GGAAATCGTG
TTCGGACTTA TCGAGGGTGA TCGCTACGCG GCAAAGAACA GCTTCATCGT AAAGGCGGAA
ATCGGCAAGG GGGCGGCCTC CCATGAGCAT TGA
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| Protein sequence | MKKIVLSLLT AVAVLAFGLA IYSYVPFNSS DPIAQSAKDS KSEKGGGGKA DGEGAHEEEG
AVEMSDARVA SSGIEIAVAG PATLHDSLIL NGILQPNQET LVQVTPRFPG IVREIRRRIG
DKVENGDLLA KIESNQSLTV YEVRAPIAGT VIDRQISLGE YASEQKPAFT VADVSTVWVD
LSVYRRDLPR VRIGDKILID VGDDGKPVEA SLSYISPVGS SDTQSALARA IVPNTDMRLR
TGLFVSARLI LAARQVPLAV RTSAVQTIEN RNVVFVRKGD KFEVRDVELG ARDSENVEIV
FGLIEGDRYA AKNSFIVKAE IGKGAASHEH
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