Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2291 |
Symbol | |
ID | 6409952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2480914 |
End bp | 2481522 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642712173 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001991284 |
Protein GI | 192290679 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGACT GGATCGTGAG TGGAATAGAA AAGGCGGGAG CCGTCGGCGT CTTCCTTCTA ATGCTCGCCG AGAACATCTT CCCCCCAATT CCGTCCGAGG TTGTCATGCC GCTTGCCGGC TACGTAGCTT CTCGCGGAGA TTTGGACATC TACGCCGTCG TCTTCGCGGG AACGCTAGGA TCTCTCATCG GGACGACCGT TTGGTACTAC GCCGGCCGCA CGTTGGGCTC CGAACGTCTC CGGATCTTCG CAATCAGACA TGGTCGATGG CTCACCATGA CACCGGAGGA AATCGATCGC GCAGCCGTGT GGTTCGACCG ATATGGTACC TGGGCGGTGT TCTTGGGACG GTTGATTCCA GGCGTTCGCA CGCTGATTTC GTTACCAGCG GGCATCACGG GAATGCCCAT CTTGAGGTTC ATCTCCTACT CGGCAGTAGG GACCGCGCTA TGGACGGCAG CCCTTGCTAT TGCAGGCTAT GGGATGGGAC AGAACTACGC CCTGATCGGA CGTTTTGTTG AGCCAGTTTC GAACTGGCTA TTGATACTTG CGGCAGCCGT ATACGCTTAT CGCGTTGTGA CCTTCGGACA TAAACGGGAC CGTCGATGA
|
Protein sequence | MFDWIVSGIE KAGAVGVFLL MLAENIFPPI PSEVVMPLAG YVASRGDLDI YAVVFAGTLG SLIGTTVWYY AGRTLGSERL RIFAIRHGRW LTMTPEEIDR AAVWFDRYGT WAVFLGRLIP GVRTLISLPA GITGMPILRF ISYSAVGTAL WTAALAIAGY GMGQNYALIG RFVEPVSNWL LILAAAVYAY RVVTFGHKRD RR
|
| |