| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2286 |
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| Symbol | |
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| ID | 6409947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2475251 |
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| End bp | 2476168 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642712168 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001991279 |
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| Protein GI | 192290674 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.76035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGGCG ACAAACAACC AAAGGATTCG ATTGCAGCGG GGACAGCGGC CTCCCGCCAT
AAGGGTAAAC TTATCGTCGC ATTCGGCCTT ACCAGCAGTT TCATGATTCT GGAGGTGATC
GGCGGACTAT GGACCGGCAG CCTCGCGCTG TTGGCCGATG CAGCGCACAT GCTCACGGAC
GCAGGTGGCT TGGCGCTCGC GCTGATTGCG ATCCAATTCG CTGAGCGAGC GAGAACGCCG
AAGAACACAT TTGGCTATGT TCGACTGGAA GTGCTGTCCG CACTAACCAA CGCTGTCGTA
CTTCTCCTAC TCACGGTGTA CATCCTTTAC GAGGCCTACC AAAGGTTTAA ATCCCCGCCT
GATATCATCG GTGGTCCGAT GTTGTTGGTC GCCTTTGCCG GGCTTGTGGT CAACTTCATC
AGCATGAGGC TGCTGGCCGG CGGCTCGAAA GAAAGCTTGA ACGTTAAAGG CGCCTACTTT
GAGGTGCTCG CAGACCTTCT TGGTTCACTC GGCGTCGTTG CAGCGGCTGT GGTGGTATTG
CTGACCGGCT GGAAACCCAT TGACCCCATC ATCGGCGCCG GAATCGGGCT CTTCATCGTT
CCGCGTACTT GGACGCTGAT GACCCAAGCA GTCCATATCC TGATGGAAGG GACGCCGCCC
CAAGTAGACA TGAAGCTTCT TGAGCAGACT TTGCTTTTGG TTCCCGGCAC TGTCGTCGTC
AAGGACTTGC ATGTCTGGTC CGTCACTTCG GGCTTCGACG CGATGAGTTG TCACCTTGTG
GTGGATGACT CGGGAGCGAG AGACACTATC CTTGCCGCCG CGCAAGCGGC CATGTCGACA
TTCTTCGGAC TAACGCACGT AACAATTCAG ATCGAGGGGA CACCCCACGA CCGAGCAGAA
ATTGAGCAGC GGTTCTGA
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| Protein sequence | MTGDKQPKDS IAAGTAASRH KGKLIVAFGL TSSFMILEVI GGLWTGSLAL LADAAHMLTD
AGGLALALIA IQFAERARTP KNTFGYVRLE VLSALTNAVV LLLLTVYILY EAYQRFKSPP
DIIGGPMLLV AFAGLVVNFI SMRLLAGGSK ESLNVKGAYF EVLADLLGSL GVVAAAVVVL
LTGWKPIDPI IGAGIGLFIV PRTWTLMTQA VHILMEGTPP QVDMKLLEQT LLLVPGTVVV
KDLHVWSVTS GFDAMSCHLV VDDSGARDTI LAAAQAAMST FFGLTHVTIQ IEGTPHDRAE
IEQRF
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