| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2272 |
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| Symbol | |
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| ID | 6409933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2459573 |
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| End bp | 2461594 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712157 |
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| Product | ATPase associated with various cellular activities AAA_5 |
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| Protein accession | YP_001991268 |
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| Protein GI | 192290663 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACA GCGATTCGAG AAGCAAGACG GAAGAATACT GGCTGACAAC CGTTGAGGAG
GACCGCGCAG AGTCCGCGCC GGCGCCGGCT GATCCGGCTG ATCTCGACAT CCTCGAGCTC
CCCACCGCGG CCATCGACGC CATGCTGTGC CCGACGGAGC GCGAGGCGGT CGACTGCGCC
ATCGTGCGCG CCGAGGTCGC GCTGCGCGGC CGGACGGATC GCCTGCAGGT CGACTTAGCC
AAGATGCGGA CGCCAAAGGC CGATGCCATC GATCGCCTGC GGTGGTCGTC CGAGTGCCGC
GCGATAGCCT CTGAACTCGA AGCGATCGGC GGCGCCGCAG CTAACGAAGC CGCCCTCCTC
TGGTGGATGC TGTCGTCATC GCCGCGAGAC CCCGGGACGT GCGCGGTCGC TGTCGACCTG
GCGAAGATCG CCCCGCGGAT CCGGTGGCCG GAGAAGGCCG ACGAGATCAA GGCGCGACTC
AGTGTCTGGA GGCGCGCCTA CGCCGGCAAG TACGTGGACG ACAACCGCGA CCTTTTCGCC
ATCGCCGAGG AAGAGATTAT GAGATCGAAG AATCCGACGA TGCGGAAGAA CTACGGGTCA
GTTCCGCTCT CGGTGCTACT CTGCGACGAC GAGAAGTCTG CCGTCGCGCT GGTCGTCAAA
TACACGCGGA AGATCTCGGG ACCACCGTAC GTCGATGTTC CTGACTTCCT GGTGAGCACG
CCGCCGAAGG ACGGGGATCG GCGCATCTGG TGGCGCACTG AGTGCCGCCG GATGTCGTCC
CGGCTATCCG AGCGCGCCGA CGATGGCCTC GCCGGAGCGA CCGCGCTCGC GTGGCGGATG
CTCGCCGCCG ACCCGGCCGA TACGCGGACA TTTTTGCCGG TCCTGCCGGC TCTGAGGCAT
CTCGCGGACC GGTGCACATG GTCGGATGAC CAGAAGTCCA AGCTGACGGC GCGCCTAGCT
ATATGGACCC TGGCAGCCTC CGGCGAGTAC GGCCGCGATC CGCGCGACAT GTTCGTGATC
GCCGCGCAGC AGTCCGAGTC CCTGCACGCC GACGAGGGTC ATGACGATCC GGCGGTCGAA
GAGCTCTGCA ATCGCGCCCA TGCAGCGCTG AGTCGCCGGA AAGTGCGCCT CCCGTCGTCG
CCGGCCAGGC CGAGGCCGGC GCCGGATGGC CCTGCTGTCG TCGTGATGAC CGAGGCGCCG
GTCGAGAAGA AGCACATGCC GGACGTCTGG AAGCGCCTGG AAGGCGCCGA CGTGCCGCTG
GTAGTCTGCC GCGACGCTGC CGTCGTCCGG CAGGCACTGG AGGCCGAGTA CCCGCACGCG
CGCGCTGCCG TGGCGATGCT GACGCAGGAT CTGCGGGACG GCGAGCCGGT CCGGATGCGG
CCGACCCTCC TCGTTGGTCC CCCAGGCTCC GGCAAGTCGC GCCTGGTGCG CCGGATCGGG
GAACTACTCG GCGTCTATGT TTACAGGCTC GACGCAACCG CCAGCGCCGA CGGATTTTTC
GCCGGCACCA ACCGCGCATG GCACTCGTCG GCCCCCTCCG TGCCCGCGCG CGCGATCGCG
GCGGCGATGC GCGCAAACCC AATCGTGATG ATTGACGAGA TCGAGAAGGC CGCCGAGAGC
ACTATGAACG GAAACCTATG GTCGGCGATG GCGCCTCTTC TGGAGCGCGA GACCTCGCGT
AGCTACAGAG ACTGCGGCCT CGACGCCCAG CTCGATCTCT CGCACGTCAA CCATGTCGCC
ACCGCGAACA CGACAGAGCG GTTGCCGTCG TTCCTGCGCG ACCGCTTCAG GCTGATCCGC
GTCCCGTCCC CCACGCTGGC GCACCTGCCG GCGTTGGCGG CGCTGGTCCT GCAGGACATC
GCGCGGGACG ACGACGCGCG CGCCGGGGCA CCACCACTGG CGCCCGACGA GCTCGACGTG
ATCGGCCGGG CGTGGGCCCG GGAGAAATTC TCGATGCGCA AGCTGGCGCG CCTGGTCGAG
GCGACCCTCG AGGCGCGCGA CGCCTGCGCG CCGCGGCACT GA
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| Protein sequence | MSDSDSRSKT EEYWLTTVEE DRAESAPAPA DPADLDILEL PTAAIDAMLC PTEREAVDCA
IVRAEVALRG RTDRLQVDLA KMRTPKADAI DRLRWSSECR AIASELEAIG GAAANEAALL
WWMLSSSPRD PGTCAVAVDL AKIAPRIRWP EKADEIKARL SVWRRAYAGK YVDDNRDLFA
IAEEEIMRSK NPTMRKNYGS VPLSVLLCDD EKSAVALVVK YTRKISGPPY VDVPDFLVST
PPKDGDRRIW WRTECRRMSS RLSERADDGL AGATALAWRM LAADPADTRT FLPVLPALRH
LADRCTWSDD QKSKLTARLA IWTLAASGEY GRDPRDMFVI AAQQSESLHA DEGHDDPAVE
ELCNRAHAAL SRRKVRLPSS PARPRPAPDG PAVVVMTEAP VEKKHMPDVW KRLEGADVPL
VVCRDAAVVR QALEAEYPHA RAAVAMLTQD LRDGEPVRMR PTLLVGPPGS GKSRLVRRIG
ELLGVYVYRL DATASADGFF AGTNRAWHSS APSVPARAIA AAMRANPIVM IDEIEKAAES
TMNGNLWSAM APLLERETSR SYRDCGLDAQ LDLSHVNHVA TANTTERLPS FLRDRFRLIR
VPSPTLAHLP ALAALVLQDI ARDDDARAGA PPLAPDELDV IGRAWAREKF SMRKLARLVE
ATLEARDACA PRH
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