| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2261 |
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| Symbol | |
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| ID | 6409921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2453829 |
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| End bp | 2454413 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642712145 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_001991257 |
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| Protein GI | 192290652 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.115661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCTGC GCATCCTGGA CAGGCTCGAG GAAATTCTGA TTGCCACGAT GATCGGCGGC
GCCACGCTGC TGATCTTCAT CGCGGTGATG CATCGCTATT TGGTTGGCAT CCCATTCCTC
TATCCGATCT TGTTTCCGAT CGACCTGTCG TGGGCGCAGG AACTGTGCAT CTACATGTTC
GTGTGGATGG CGAAGTTCGG TGCCGCCTAC GGCGTGCGCA CCGGCATCCA CGTCGGCGTC
GACGTGCTGG TCAACGTGAT GCGGCCGAAC CTGCGCAAGG TGACGATCCT GTTCGGGTTG
TTCTGCGGCG CGTTCTTCAC CTTCATCATC GGCACGATGG GTGCCAAATT CGTCTACGGC
CTGATCAACA CCAACCAGAC CTCGCCGGAT CTCGAGATCC CGAGCTGGAT CGTCTATCTC
TGCATTCCGC TCGGTTCATA TCTGATGTGC TTCCGCTTCC TCCAGGTCGC CTACCACTTC
TGGCGCCATG ATCATCTGCC GCATCACGAT CACGGCCAGG TCGAGGGGAT CGACGAACCG
CATATGCCCG GGTCGGCGGC GGCAGCAGCG GAGGCCGTCC GATGA
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| Protein sequence | MVLRILDRLE EILIATMIGG ATLLIFIAVM HRYLVGIPFL YPILFPIDLS WAQELCIYMF
VWMAKFGAAY GVRTGIHVGV DVLVNVMRPN LRKVTILFGL FCGAFFTFII GTMGAKFVYG
LINTNQTSPD LEIPSWIVYL CIPLGSYLMC FRFLQVAYHF WRHDHLPHHD HGQVEGIDEP
HMPGSAAAAA EAVR
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