Gene Rpal_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2255 
Symbol 
ID6409915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2447554 
End bp2448576 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID642712139 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_001991251 
Protein GI192290646 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.387928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCG GCTTTCGACA CTTCGCTGCG GCGCTTGCCG CGATCCTGCT CACCGCCGGG 
GCTGCGCAGG CGCAGAGCAA GGTGACGATC GCGATCGGCG GCGGCGCCTG CCTGTGCTAT
CTGCCGACCG TGCTGGCCAA GCAGCTCGGC GAGTACGACA AGGCCGGACT CGCCGTCGAA
CTGGTCGATC TCAAGGGCGG CTCGGATGCG CTCAAAGCCG TGCTCGGCGG CAGCGCCGAC
GTCGTCTCCG GCTATTTCGA CCACACCGTC AACCTTGCCG CGAAGAAGCA GGAGATGCAG
AGCTTCGTGG TCTACGACCG CTATCCCGGT CTGGTGCTGG CGGTGTCGCC GGGCCACACT
GCGGAGATCA AGTCGATCAA GGAACTCGCC GGCAAGAAGG TTGGCGTGAG CGCACCGGGC
TCGTCGACCG ATTTCTTTCT CAAGTACCTG CTGAAGAAGA ACGGCGTCGA CCCGAATAAT
GTCGCGGTGG TCGGCGTCGG CCTCGGCGCC ACCGCGGTGG CGGCGATGCA GCAGGGCCAG
ATCGACGCGG CGGTGATGCT CGATCCGGCG GTGACGATCC TGCAGGCGGC GCACGCAGAC
CTCCGCATCC TCAGCGACAC CCGCACCGAG CACGACACGC GCGAGGTGTT CGGCGGCGAC
TATCCGGGCG GCGCGCTGTA CGCCACCACG GCCTGGATCA AGGCACATCC GAACGAGGCG
CAGGGGCTCA CCAAGGCGAT CCTCGGCACG TTGAATTGGA TCCATGCGCA TTCGGCCGAG
GAAATCGCCG ACAAGATGCC GGCCAACATC GTCGGCAAGG ACAAGGCGCA ATACGTTGCC
GCGCTGAAGA ACACGATCCC GATGTACTCG ACCACAGGCC TGATGGACCC GAAGGGGGCG
GATGCGGTGC TGGCGGTTTT CAGCACCAGC TCGCCGGACG TGGCGAGGGC GAATATCGAC
GTCACCAAGA CCTACACCAA CGCCTTCGTC GAACAGGCGA AGGCGTCTGG TGCCGCGAAA
TAA
 
Protein sequence
MKAGFRHFAA ALAAILLTAG AAQAQSKVTI AIGGGACLCY LPTVLAKQLG EYDKAGLAVE 
LVDLKGGSDA LKAVLGGSAD VVSGYFDHTV NLAAKKQEMQ SFVVYDRYPG LVLAVSPGHT
AEIKSIKELA GKKVGVSAPG SSTDFFLKYL LKKNGVDPNN VAVVGVGLGA TAVAAMQQGQ
IDAAVMLDPA VTILQAAHAD LRILSDTRTE HDTREVFGGD YPGGALYATT AWIKAHPNEA
QGLTKAILGT LNWIHAHSAE EIADKMPANI VGKDKAQYVA ALKNTIPMYS TTGLMDPKGA
DAVLAVFSTS SPDVARANID VTKTYTNAFV EQAKASGAAK