| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2249 |
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| Symbol | |
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| ID | 6409909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2440568 |
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| End bp | 2441422 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712133 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001991245 |
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| Protein GI | 192290640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTG TCGTCGTCAC CGGCGTGTCC AGCGGGATCG GCCATGCCAT TGCGCGGATG
CTGCTGGATA AGGGATTTCG CGTGTTCGGC AGCGTGCGGA AACACAGCGA CGCTGAGCGG
CTGATCGTTG AATTAGGGGC CGGCTTCACG CCGCTGGTTT TCGACGTCAC AGATGAAACC
GCGATCCGGG CCGCCGCGGA CGAAGTGCGA CGGGCGCTCG ACGGCGAGAC GCTCGCCGGG
CTCGTCAACA ATGCCGGCAT CGCGGTGGCG GGCCCAGTGC TCGATCTGCC GGCCGACGAA
TTCCGCCGGC AGTTCGAGGT CAATGTGATC GGGCCGATCC TTGCGACCCA GGCGTTCGGG
CCGCTACTCG GCACCGACCG GTCGCTGCGC GGTGCGCCGG GGCGGATCGT GATGATGTCG
TCGATCGCCG GCAAGTTCGG CAATCCGCTG ATGGCTGCGT ACTCGGCCTC CAAGCACGCG
CTGAACGGCC TGTCGGACGG GCTTCGGCGC GAACTGATGC TGTTCGGCAT CGACGTGGTC
GTGATCATGC CGGGCGCCGT CAAAACGCCG ATCTGGGGCA AGGCCGAGCG CGAGGACGTG
TCGCGGTTTG CGAACTCGCC GTTCTATCCG GCGCTGCAGA AGCTGCGCGC GCTGCTGCCT
GAGATGGACG AAGGCGGCCT GCCGCCGGTG ACGATCGCCC AGCACGTTTA TGACGCGCTC
ACCGCGCCGT CGCCGAAGGC ACACGACGTC ATCACCCCGG GACCGCTGCA GTTCTGGCTC
TCGACCAAGC TGCCGCCGCG ATGGATCGAC AAGATCGTCG CGAAACGGCT CGGACTGAAG
CCCGCGAAGT CATGA
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| Protein sequence | MKSVVVTGVS SGIGHAIARM LLDKGFRVFG SVRKHSDAER LIVELGAGFT PLVFDVTDET
AIRAAADEVR RALDGETLAG LVNNAGIAVA GPVLDLPADE FRRQFEVNVI GPILATQAFG
PLLGTDRSLR GAPGRIVMMS SIAGKFGNPL MAAYSASKHA LNGLSDGLRR ELMLFGIDVV
VIMPGAVKTP IWGKAEREDV SRFANSPFYP ALQKLRALLP EMDEGGLPPV TIAQHVYDAL
TAPSPKAHDV ITPGPLQFWL STKLPPRWID KIVAKRLGLK PAKS
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