| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2244 |
|---|
| Symbol | |
|---|
| ID | 6409904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2435394 |
|---|
| End bp | 2435792 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642712128 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001991240 |
|---|
| Protein GI | 192290635 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG5622] Protein required for attachment to host cells |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.287622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA TTCCGCACAA CACGCTCGTC GTCGTCGCTG ATGGCCGCGG CGCCCTGCTG
CTGCGCAACA CCGGCAAGCC GGCCGACGTG ACGTTGCGCC AGGAGCGCAA GCTCGAGCCG
ACCAATCTGG ACAACGACGG CCCGTCGGGC TCGCGCCCCG AGGAGCAGAG CCAGAGTCAG
ACCGACGAAG CGACCTTCGC CAAGCAGCTC ACCAACACGC TGAACAAGAT GAAGCTCGAC
GGCGAGTTCG ATCAGCTGGT GCTGGTCGCG GATCCGCAGA CGCTCGGCCA GATGCGGCCG
ATCCTGCACA AGACCGTCGA GGCCTCGCTG ATCCGCTCAC TGGCGAAGGA TCTCACCAAC
CATCCGCTCG AACAGATCGC CGAGGCGATC GCGGCGTAG
|
|---|
| Protein sequence | MTLIPHNTLV VVADGRGALL LRNTGKPADV TLRQERKLEP TNLDNDGPSG SRPEEQSQSQ
TDEATFAKQL TNTLNKMKLD GEFDQLVLVA DPQTLGQMRP ILHKTVEASL IRSLAKDLTN
HPLEQIAEAI AA
|
|---|
| |