| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2238 |
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| Symbol | |
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| ID | 6409898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2428040 |
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| End bp | 2429791 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712122 |
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| Product | protein of unknown function DUF87 |
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| Protein accession | YP_001991234 |
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| Protein GI | 192290629 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.457422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAG CTGTTGCTCA AGGGGCGTTC GGCAAGGTGA TCTCGGTGCG CGGCTCCGGT
GCGCGCGTCG GGCTATTGCC GTCGAGCCGG CTGGTGCCCT CTGCCGTACG CGCCACCGTG
GGCCGCTTCG TCAGCATCCG GACCGCAAGC TCCACCATCA TCGCGATCAT CACCGAGGTG
TCGAGCGAGA ACCTCGCCGA GACCGACGAG CATATCGCGG TCGCGTCGGT CGATCTGCTC
GGCGAGATCC TGCCGGGGCC GCTGCGGCCG AAGTTCCAGC GCGGCGTCAC CAACTACCCG
ACCATCGGCG ACTCGGTGGA CCTGATCTCC AGCGACGACC TGCGCATCGT CTATGAGCCG
ACTGGCTCCG ACCAGATCGA TGTCGGAACG CTGCAGCAGG ACCCGTCGGT GATCGCCTAT
GTCGACATCG AAGAAATGCT GTCGAAGCAT TTCGCCGTGC TCGGCTCGAC CGGCGTCGGC
AAATCCACCG GCGTGTCGCT GCTGCTCAAC GAAATCCTGA AGTCCCGCCC GGCACTGCGC
ATCTTCCTGC TGGACGTCCA CAACGAATAC GGCCGCAGTT TCGGCGACAA AGCGCTGGTG
CTCAATCCGC GCAATCTGAA GCTGCCGTTC TGGCTGTTCA ACTTCGAGGA AATCGTCGAC
GTGCTGTTCG CCGGCCGCCC CGGCGTGCCC GAAGAACTCG ACATCCTGGC CGAGGTGATC
CCCGTCGCTA AAGGCCTTTA CGTGCAATAC ACCAGCACCG ACCGGCTCGG TCTGAAGCGG
GTCGATCCGA AGTCGATCGG CTACACCGCC GACACGCCGG TGCCATATCG CCTCGTCGAT
CTGATCTCGC TGATCGACGA GCGCATGGGG AAGCTGGAAA ACCGCTCCTC GCGCATCATC
TATCACAAGC TGATCTCGCG CATCGAGACC GTGCGCAACG ATCCGCGCTA CGCCTTCATG
TTCGACAACG CCAATGTCGG CGGCGACACC ATGGCGGACG TGATCAGCCA TCTGTTCCGC
CTGCCCGCCA ACGGCAAGCC GATGACGATC ATGCAGCTCG CCGGCTTCCC GGCCGAGGTG
GTCGACTCGG TGGTGTCAGT GCTGTGCCGG ATGGCATTCG ACTTCGGCCT GTGGAGCGAC
GGCGTGTCAC CGCTGCTGTT TGTCTGCGAA GAGGCCCACC GTTACGCTGC GGCCGACCGC
GCCATCGGTT TCGGCCCGAC CCGCAAGGCG GTGTCACGCA TCGCCAAGGA AGGCCGCAAA
TACGGGGTCT ATCTCGGCCT CGTCACTCAG CGCCCGGCCG AACTCGACGC AACGATCCTG
TCCCAGTGCA ACACGCTGTT CGCGATGCGG CTCGCCAACG ACCGCGACCA GTCGCTGCTG
CGTTCGGCGG TGTCCGACGC CGCCGCGAAC CTTCTCTCTT TCGTTCCCTC GCTCGGCACC
CGCGAAGTGC TGGCGTTCGG CGAAGGCGTG GCCCTTCCGA CCCGCCTGCG CTTCAAGGAA
GTGCCGGCGC ATCAGCTGCC GCGCAGCGAG GCTGCGATCT CCACCGTGCC GTCGGCGGCC
GCAGGCAACG ACATGCACTT CGTCAGCGCG GTGCTTGAGC GCTGGCGCGG CGCCACCTCA
CATCGCGACG TGCCGAACGA TCCGGGCATC GCCGAACGCC CGCTGGCGCG GACGCTGGAC
GCTCCGATGC TGCAGCCCTC GCTCGGGCTC GATCCAGATC GGTTTTCTCT GCTGAAGAAG
CCGCTGCGCT GA
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| Protein sequence | MAEAVAQGAF GKVISVRGSG ARVGLLPSSR LVPSAVRATV GRFVSIRTAS STIIAIITEV
SSENLAETDE HIAVASVDLL GEILPGPLRP KFQRGVTNYP TIGDSVDLIS SDDLRIVYEP
TGSDQIDVGT LQQDPSVIAY VDIEEMLSKH FAVLGSTGVG KSTGVSLLLN EILKSRPALR
IFLLDVHNEY GRSFGDKALV LNPRNLKLPF WLFNFEEIVD VLFAGRPGVP EELDILAEVI
PVAKGLYVQY TSTDRLGLKR VDPKSIGYTA DTPVPYRLVD LISLIDERMG KLENRSSRII
YHKLISRIET VRNDPRYAFM FDNANVGGDT MADVISHLFR LPANGKPMTI MQLAGFPAEV
VDSVVSVLCR MAFDFGLWSD GVSPLLFVCE EAHRYAAADR AIGFGPTRKA VSRIAKEGRK
YGVYLGLVTQ RPAELDATIL SQCNTLFAMR LANDRDQSLL RSAVSDAAAN LLSFVPSLGT
REVLAFGEGV ALPTRLRFKE VPAHQLPRSE AAISTVPSAA AGNDMHFVSA VLERWRGATS
HRDVPNDPGI AERPLARTLD APMLQPSLGL DPDRFSLLKK PLR
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