Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2237 |
Symbol | |
ID | 6409897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2425702 |
End bp | 2428035 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712121 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001991233 |
Protein GI | 192290628 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGGGCA CGTTGAAGGA CCTGAATTTC CCGGCAGCGG GAGCGCTGTC GTTTGTCTGC GCGTCGGTTC TCCTCATCTC CCATACGGCC GCTGCACAAG AAGCTCCTGC GCCGGCTTCC GCTCCGAGTG CTTCAACTGA ATCTCCTACG AGTGCGACAG GACGATCACT ACCTGCCATC GTCGTCGAGA CGTCGCGACG TCGTGCCGCG GCGATGTCCC CGCAGCGCAG GCCGTCGCAA GTGTCGCGAT CAACAGCCAG CCGACGGGCC CCGAACCCGG CCAGCGCCGC AGCGCAGCCT CGCCCGGTTT CGGCAGGCGC TCTGCAGGCG ACCTTGCCGG CTGGCTTTCC GGGAGATCAG GTCGCGCGCG GTGCTGGCGT GGGTCTCCTC GGCAACCGTG ACGTGATGTC GACGCCGTTC AGCCTTACCA GCTTCACGGA GAAGCTCATC CGGGATCAGC AGTCGCGAAC GCTGCTCGAC GTGCTCGGCA ACGATCCCTC CGTGCGCTCC AACGTGCCGG CCTACAGCGG CATCCAGGGC TTCTTCATTC GCGGCTTCCC GGTGTTCGCT CAGGACATCG CCTTCAACGG CCTGTATGGC GTCGCCGACT CCTTCAATCC GGCGCTCGAG CCGATCGAAC GCGTCGAAGT GCAGCACGGC CCGAGCACGA TGCTGAGCGG CATGCCGCCG TTCGGGACCA TCGGCGGGAC GATCAATCTG ATCCCGAAGC GCGCCGGTGA CGTGCCGCTG ACGCGGTTCA CGACCGGATT CATCTCCAAC GCGCAGAGCT ACAACGCCAT CGATGTCGGC CGGCGTTATG GCACCAATGG CGAGTGGGGC ATCCGCTTCA ACGGCGCGTA TCAGTCCGGC AGCACGCCGA TCGACAACCA GAAACAAGAG TACGGCGTCA CCTCGCTGGC GCTCGACTAC CGTGGCGAAC GCCTGCGGGT CGGCCTCGAC CTCGGCTATC AGAAGGTCGA CTTCAATTCG CCGCTGCGCA ATCGCTCGGT GCTGCCGGGC TTTCCGATCC CTCAAGCGCC GGATCTGCGG ATCAATCAGC AGCAGCCGTG GGAATATCGC GACAGCAACA ACAAATCGGC CGCCATCCGT GCCGAGTACG ATCTGACCGA TCAACTCACC GTCTATGCCG CCTACGGCCA TAGTGAATTT CATCAGGTCT ACTTCGGCGG TCTGCCGTCG ATCATCAACG CGCGCGGCGA CTACCGCGAT ACGATCCAGC TCACCCCGTT CCAGACCTAC AGCAACACCG GCGAAGTCGG CGTGCGCGGC CAGTTCGAAA CCGGACCGGT GAAGCACCGG GTCGGCGTTG CGGCGTCCGG CCTCTGGCAG GATACCGGCC TGACCAACAT TCCGGTTGGT GCGGCCATCA CCTCGAACAT CTACAATCCG GTGTACGCGC CGCCGCGCAG CGATGCCGGA CTGCCGCGGA CCTCGCCGAC GACAGCGGAG CGCTTCAACC GCAGCATCGC CATCGCCGAT ACGATGTCGA TCCTGAATGA TCGCGTCGAG CTGACGATCG GCGGTCGCTG GCAGGGCATC GACGCCAAGA CGCTGAGCCC GGTGACGGGC CTGGTGACGT CCGATGCGCG CAACGATGCA TTTTCTCCGG GCGCCGGTCT GGTCATCAAG CCGATCGAGC GGCTGTCGCT CTACGCCAAC TACATCGAAG GTCTGACTTC GACGGCGCCG CCGACCAATG CGGTCAACCT CAACCAGAGC TTCCCCGCGA CAGTATCGAA ACAGGTCGAG GCCGGCGCGA AATATGACTT TGGCCCGGTT GGTGTGTCAG TTGCCGGCTT CGAGATCAAG CAGCCGAGCG GTTTCCTCGA TCCGACCACC GGGGTGTTTG CGCTCAATGG CGAACAACGC AATCGTGGCG TCGAACTCAA CGTGTTCGGG CAGCCGATCC AGGGATTGCG TGTTGTCGGC GGCGTGAGCT GGATCGAAGG CGTGCTGACG AAAGCGTCGA ATCCCGCCTA CAACGGCAAT ACGGCGGTTG GTGTCCCGAC GATGCAGCTC AATCTCTACG GCGAGTACGA CCTGCCGGGG CCCGCTCGCG GCGTAACCAT GACCGGCCGG GTGATCCACA CCGCGTCGCA GTTCTACGAT CAGGCCAACA CCCAGAGCAT TCCAGCCTGG ACCACGCTCG ATGTCGGCGT GCGCTACACC ACCAAGATCG ACCGAGTTCC TGTGACACTG CGAGCCAACG TCCAGAACGT CACCGGCGAG AATTACTGGG CCACGACCGG TCGCGGCATT CTCAGCCCCG GCGCGCCGCG GACCTATCTG GTCTCGGCGA GCTTCGACTT CTGA
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Protein sequence | MGGTLKDLNF PAAGALSFVC ASVLLISHTA AAQEAPAPAS APSASTESPT SATGRSLPAI VVETSRRRAA AMSPQRRPSQ VSRSTASRRA PNPASAAAQP RPVSAGALQA TLPAGFPGDQ VARGAGVGLL GNRDVMSTPF SLTSFTEKLI RDQQSRTLLD VLGNDPSVRS NVPAYSGIQG FFIRGFPVFA QDIAFNGLYG VADSFNPALE PIERVEVQHG PSTMLSGMPP FGTIGGTINL IPKRAGDVPL TRFTTGFISN AQSYNAIDVG RRYGTNGEWG IRFNGAYQSG STPIDNQKQE YGVTSLALDY RGERLRVGLD LGYQKVDFNS PLRNRSVLPG FPIPQAPDLR INQQQPWEYR DSNNKSAAIR AEYDLTDQLT VYAAYGHSEF HQVYFGGLPS IINARGDYRD TIQLTPFQTY SNTGEVGVRG QFETGPVKHR VGVAASGLWQ DTGLTNIPVG AAITSNIYNP VYAPPRSDAG LPRTSPTTAE RFNRSIAIAD TMSILNDRVE LTIGGRWQGI DAKTLSPVTG LVTSDARNDA FSPGAGLVIK PIERLSLYAN YIEGLTSTAP PTNAVNLNQS FPATVSKQVE AGAKYDFGPV GVSVAGFEIK QPSGFLDPTT GVFALNGEQR NRGVELNVFG QPIQGLRVVG GVSWIEGVLT KASNPAYNGN TAVGVPTMQL NLYGEYDLPG PARGVTMTGR VIHTASQFYD QANTQSIPAW TTLDVGVRYT TKIDRVPVTL RANVQNVTGE NYWATTGRGI LSPGAPRTYL VSASFDF
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