| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2228 |
|---|
| Symbol | |
|---|
| ID | 6409888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2418138 |
|---|
| End bp | 2419070 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642712112 |
|---|
| Product | lipid A biosynthesis lauroyl acyltransferase |
|---|
| Protein accession | YP_001991224 |
|---|
| Protein GI | 192290619 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA CCCTGTATCG CGCCAAGCTG CGCGCCCAGC GTGCGGCCAA GGGCCTTGTC
GGCAAGATCG TCGGCCCGGT GGCGATCGGG GCGTTGCATC TGGCGCGGAA GTTCGATCCC
GACAAAAGTG CCCGGCTGTT CGGCGCCGTC GCCCGCAAGT TCGGCCCTCG CTTTCCGGAG
CAGCGGATCG GCCGTGACAA TCTTACCGCG GCCTTTCCAG AGAAGTCGCC GGACGAGATC
GAGGCCATTC TGGCCGGCGT CTGGGACAAT CTCGGCCGGT CCGCCGCGGA GTTCGCGCAT
CTCGACGCGG TATGGGACTA TGATCCCGAG CACCCGGAGC GCAGCCGCAT CGAGGTGACG
GCGCGGTCGC TCGAACTGTT CGAGAAGCTG CGCGATGACG GCAAGCCGGC GCTGATCTTC
GCCAGCCATC TCGGCAATTG GGAGCTGCCC GCGGTCGCCG CGGTCGCACA CGGCCTCGAC
ACTGCCGTGC TGTATCGCCG CCCCAACATC GAAGCCGCCG ACCGTATCGT CGAGGAAATT
CGCTCGGTGA AGATGGGCCA GCTCGTCGCC GCAGGGTCGA GTGCGCCGTT CAAGCTGGCG
CAGGCGCTGC AGGACGGCAA GCATGTCGGC ATGCTGATCG ATCAGCATTT CACCAAGGGC
GTCGACGTCA CCTTCTTCGG CCGTACCGCG AAGGCCAACC CGCTGCTGGC AAAGCTGCTG
CGGCAGATCG AGTGCCCGCT GCACGGCGCC CGCGTCATCC GCCTCCCCGA CGGCCGTTTC
CGCGCCGAGT TGACCGAAGA GGTCCAGCCG ATCCGCGATG CCGACGGCCG GATCGACATT
CAGGGCACCA TGCAGGCGTG CACCTCGGTG ATCGAAAGCT GGATCCGCGA AACACCCGAG
CAATGGCTGT GGCTGCACCG CCGCTGGCGG TAG
|
|---|
| Protein sequence | MKVTLYRAKL RAQRAAKGLV GKIVGPVAIG ALHLARKFDP DKSARLFGAV ARKFGPRFPE
QRIGRDNLTA AFPEKSPDEI EAILAGVWDN LGRSAAEFAH LDAVWDYDPE HPERSRIEVT
ARSLELFEKL RDDGKPALIF ASHLGNWELP AVAAVAHGLD TAVLYRRPNI EAADRIVEEI
RSVKMGQLVA AGSSAPFKLA QALQDGKHVG MLIDQHFTKG VDVTFFGRTA KANPLLAKLL
RQIECPLHGA RVIRLPDGRF RAELTEEVQP IRDADGRIDI QGTMQACTSV IESWIRETPE
QWLWLHRRWR
|
|---|
| |