| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2225 |
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| Symbol | |
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| ID | 6409885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2413511 |
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| End bp | 2414626 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642712109 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001991221 |
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| Protein GI | 192290616 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTG ACACGATGCG GCGGCGACTG CTGACTTTGG GCGCGGGGAT CGCGTTGTCG
GTGTCGCTCA TCCTGCCTGG CTCGGCGCAG GACCGCACCG TCAATTTCTA CAACTGGTCG
AACTACATCG CACCGGGCGT CCTCGACGAC TTCACGCGCG AGACCGGCAT CAAGGTGGTG
TACGACACCT TCGACGCCAA CGAGACGCTG GAAACCAAGC TGCTCGCCGG CAAATCCGGC
TACGATGTCG TGGTGCCGAC CGCGTATTTC CTGCAGCGGC AGATCACCGC CGGTGTGTTC
CAGAAGCTCG ACAAGTCGAA GCTTCCCAAT CTCAAAAACG CCTGGGACTT CGTCACCGAC
AAGCTGGCGC TGTACGATCC CGGCAATCAG TTTGCCGTCA ACTACATGTG GGGCACCACC
GGGATCGGCT ACAACGTCGC CGCGGTGAAG CGGGTTCTCG GCGACGATGC CGCGATCGAC
AGTTGGGAGA TGATCTTCAA GCCGGAGAAC CTGGCGAAGT TCAAGGAGTG CGGCGTCCAT
ATGCTGGATT CCGCCGACGA CATCCTGCCG GCGGCGCTGA CCTATCTCGG CCGCGATCCG
AATTCGACCA ACAAGGACGA CCTCGAAAAG GCCGCCGAAG TCGTCGGCAA GGTGCAGCCG
TCAGTCCGCA AGTTCCATTC TTCCGAGTAT CTGAGCGCGC TGGCGACCGG CGAAATCTGC
CTCGTGGTGG CATGGTCGGG TGACATCAAG CAGGCGCAGT CGCGCGCTGC CGAAGCCCAT
AACGGCGTCG AGATCGGCTA TGTGATCCCC AAGGAAGGGG CGCAGATGTT CTTCGACAAT
CTGGCGATCC CTGCCGACGC CAAGAACGTC GCCGAAGCGT ATGAACTGAT CAACTTCTTG
TATCGGCCGG ACATCGCCGC GCGCAATTCG GACTTCCTGT CCTATGCCAA CGGCAACAAG
ACCAGCCAGG ACTTCATCAA TCCCCGCGTG CTGAACGACA AGGCAATCTA TCCGGACGCC
GCCACACAGG GCCGGCTGTT CGTGATTACC GCACGCGATC CGGCGACACA GCGCACCATC
AACCGGCTGT GGACCCGGGT GAAGACGGGG CGCTGA
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| Protein sequence | MMRDTMRRRL LTLGAGIALS VSLILPGSAQ DRTVNFYNWS NYIAPGVLDD FTRETGIKVV
YDTFDANETL ETKLLAGKSG YDVVVPTAYF LQRQITAGVF QKLDKSKLPN LKNAWDFVTD
KLALYDPGNQ FAVNYMWGTT GIGYNVAAVK RVLGDDAAID SWEMIFKPEN LAKFKECGVH
MLDSADDILP AALTYLGRDP NSTNKDDLEK AAEVVGKVQP SVRKFHSSEY LSALATGEIC
LVVAWSGDIK QAQSRAAEAH NGVEIGYVIP KEGAQMFFDN LAIPADAKNV AEAYELINFL
YRPDIAARNS DFLSYANGNK TSQDFINPRV LNDKAIYPDA ATQGRLFVIT ARDPATQRTI
NRLWTRVKTG R
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