Gene Rpal_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2224 
Symbol 
ID6409884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2412346 
End bp2413503 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID642712108 
Producthypothetical protein 
Protein accessionYP_001991220 
Protein GI192290615 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA AGGTCTTCGC CGATCTGCCC GTCACCGTGT TCGAAGCGAT GTCGCAGCTC 
GCGCGCGACA ACGACGCGAT CAATCTCGGC CAGGGCTTTC CGGACGATCC GGGGCCGGAG
GACATCCGTC GCGCCGCCGC CGACGCGGTG CTGAACGGCT ACAACCAGTA TCCGTCGATG
ATGGGGCTGC CGGAGCTGCG TCAGGCGATC TCGACGCACT ACGCGCATTG GCATGGCGTC
CAGCTCGATC CGATGACCGA AGTGATGGTC ACCTCCGGCG CCACGGAAGC GCTGGCGAGC
GCCATCCTGT CGGTGGTCGA GCCCGGCGAC GAAGTGATCG TCTTTCAGCC GGTGTACGAC
TCCTATCTGC CGATCATCCG GCAGGCCGGC GGCATTCCGC GCCTGGTCCG GCTCGAGCCG
CCGCATTGGC GGATCACCGA GGAATCTCTG CGGCGGGTGT TCAACGCCAA GACCAAGGCG
ATCGTCTTCA ACAATCCGCT CAACCCGGCT GCGGTCGTCT ATCCCCGCGA GGATCTCGAA
TTGTTGGCGC GCTTCTGCCA GGAGTTCGAC ACGGTGGCGA TCTGCGACGA GGTGTGGGAG
CACGTCACCT TCGACGGTCT CACCCACATC CCGCTGATCG CGATTCCGGG GATGCGCGAT
CGCACCATCA AGATCGGCTC CGCCGGCAAG ATCTTCTCGC TCACCGGCTG GAAGGTCGGC
TTCGTCTGCG CCGCGCCAAG GCTGCTGCGG GTCGCCGCCA AGGTTCACCA GTTCCTGGCG
TTCACCACCG CGCCGAACCT GCAGGTCGCG GTCGCCTACG GGCTCGGCAA GTGCGACGAT
TACTTCCTGC AGATGCGCAA GGATCTCGCC CGCAGCCGCG ATCGGCTGGC GCAGGGGCTG
TCCAGCATCG GCTTTCCGGT GATCCGCTCG CAGGGCACCT ATTTCCTCAC CGTCGATCTG
TCGCCGCTCG GTCTCAACGA GACCGACGAG GCGTTCTGCA AGCGGATCGT CACCGACTAC
AAGGTCGCGG CGATTCCGGT ATCGGCGTTC TACGAGGAAG AGCCGGTCAC ATCCGTGGTG
CGGTTCTGTT TCGCCAAAAA GGATCAGACG CTCGACACTG CCCTCGAGCG CCTGTCGGAT
GCGGTTCACG GGCGATAG
 
Protein sequence
MSNKVFADLP VTVFEAMSQL ARDNDAINLG QGFPDDPGPE DIRRAAADAV LNGYNQYPSM 
MGLPELRQAI STHYAHWHGV QLDPMTEVMV TSGATEALAS AILSVVEPGD EVIVFQPVYD
SYLPIIRQAG GIPRLVRLEP PHWRITEESL RRVFNAKTKA IVFNNPLNPA AVVYPREDLE
LLARFCQEFD TVAICDEVWE HVTFDGLTHI PLIAIPGMRD RTIKIGSAGK IFSLTGWKVG
FVCAAPRLLR VAAKVHQFLA FTTAPNLQVA VAYGLGKCDD YFLQMRKDLA RSRDRLAQGL
SSIGFPVIRS QGTYFLTVDL SPLGLNETDE AFCKRIVTDY KVAAIPVSAF YEEEPVTSVV
RFCFAKKDQT LDTALERLSD AVHGR