Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2220 |
Symbol | |
ID | 6409880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2408036 |
End bp | 2408809 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642712104 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_001991216 |
Protein GI | 192290611 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.362877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCA TGACGTCAGC CGGCCTGGTC GGCGGCATCG CAGTCATTGC CGTGATGATG CTGATGGGCG GCGACGTCCA TATGTTCATC TCCGAACATG CGATGATCAT CATCTTCGGT GGTTCGCTCA CAGCGACGAT GATCCGCTTC CCGCTCAACG TGATGCTGCA CGGCCTGCCG CTCGGCGCCA AATTCGCCTT CACGATGAGC CGGCTGTCGG CGCGCGATCT GGTCGATGAG CTGGCCAGCA TCGCCGAGAT CGCCCGTAAG TCCGGCCCGG TCGGCCTGGA AAAGGTCGAG GCCGAAGATC CGTTTCTGGC CAAAGGCATC CGCTACGTGG CCGACGGTTA CGACATCGAA TTCATCCGCG ATAACCTCGA GCGCGATCGC GATAACTTCC TGATGCACCT CGACGAGGGC AGCAAGATTT ATCGCGCGAT CGGCGACTGC GCCCCCGCGT TCGGCATGAT CGGCACGCTG ATCGGCATGG TGCAGATGTT CTCCAACATG TCAGACCCGT CGAAGCTTGG CCCGTTCATG GCGACGGCGC TTTTGGCGAC GCTGTATGGC GCGCTGGTGG CGAACCTGTT CTGTCTGCCG ATCGCCGACA AGCTGCACAC CAAGAAGATC GACGAAGAGA CCAACCGCAC GCTGATCATC GACGGCATCC TGATGATCCG CGACTCCAAG AGCCCGGCGC TGGTCCGCGA AATGTTGCTG GCTTACCTGC CCGAGAAGCA CCGTTCGGAA GAAGACGAAG CGGTCCCGGC TTAA
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Protein sequence | MDIMTSAGLV GGIAVIAVMM LMGGDVHMFI SEHAMIIIFG GSLTATMIRF PLNVMLHGLP LGAKFAFTMS RLSARDLVDE LASIAEIARK SGPVGLEKVE AEDPFLAKGI RYVADGYDIE FIRDNLERDR DNFLMHLDEG SKIYRAIGDC APAFGMIGTL IGMVQMFSNM SDPSKLGPFM ATALLATLYG ALVANLFCLP IADKLHTKKI DEETNRTLII DGILMIRDSK SPALVREMLL AYLPEKHRSE EDEAVPA
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