| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2214 |
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| Symbol | |
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| ID | 6409874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2400239 |
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| End bp | 2402308 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712098 |
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| Product | Gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001991210 |
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| Protein GI | 192290605 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG3258] Cytochrome c |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.143053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCATT CCCGCGGCCG CACAGCCAAG ACCCTCGCTT TCCTCGCCGC GTCCGCGCTG
GTCGTGATCG GAGGCGTGGC GCTGTGGATC ATTCAGCCGC CCGCCGTCGA CGCCAACCTC
AAGGCCGTCG ATGCTCAGGT CGATCCCGAG CTGATCAAGC GCGGCGAGTA CATCGCGCGA
GCTGGTGACT GCGTCGCATG CCACACCGCG CCGGGCGGCA CGCCGATGGC CGGCGGCCTG
AAGCTCGACA CGCCGTTCGG CAGCCTGTGG TCGACCAACA TCACGCCCGA TCGCGCCACC
GGAATCGGCA GCTGGTCGTT CGGCGAGTTC GACCGTGCCA TGCGCAAGGG CGTCGCGGCG
GACGGGCACA ATCTGTATCC GGCGATGCCG TATCCGTCCT ACGCCAAGAT CAGCAGCGAC
GACATGGTCG CGCTGTGGGC GTATCTGACC AAGGGCCTCG CACCGGTTGC GCAGGCCAAT
CGCGCGCCGG AGATGAGCTT CCCGTTCAAC ATGCGGATCG GGCTGGCGTT CTGGAACGTC
GCTTTCCTCG ATGCGTCGCC GTTCAAGCCG GAGCCGAACC AGGACGCCGT TTGGAATCGC
GGCGCCTATC TGGTGCAGGG CCTCGGTCAT TGCGGCGCCT GCCACACCCC GCGCGGCATC
GCCTTCCAGG AAAAGGCGAT GAGCGATGCC GGACCACACG GCCGCGACTA TCTCGCCGGC
GCCAAGGTCG AAAACTGGAA TGCGCTGAAC CTGCGCGGAC TGTGGACGGT GCCTGACACC
GTGCAGATGC TGAAGACTGG CCAGAACCGT TTCGCCACGG CGGCGGGCGG CATGACCGAT
GTGATCCGGC ATTCGACCCA GCACATGACC GATCAGGATC TCACCGCGAT CGCGACTTAC
CTGAAGGCGC TGCCGACCGA TCGGCCGGCG CCCGCGGCCG CCGTGGCTGA AGTGCCGGCG
TCGACCTACA CCACGGCCGG CGGGCTCGGT TACACGCAGT TCTGCGCCGA CTGCCATCGC
GCCGACGGCG CCGGAGTCCC CGGCGTGTTC CCGCCGCTCG CCGGCAATCC GACGATCGCC
GCCAAGGATC CGGCAACGCT GGTGCACATC ACCCTCACCG GTTGGGAGAC GACAGCGACC
ACCGCGCATC CGCGGGTATG GACGATGCCG TCGTTTGCCC GCCTGAACGA TCGTGAGATC
GCCGACATCC TCAGCTTCGT GCGCGCCAAT TGGGGCGGCA ACGCCAGTGC TGTCACGGCC
GAGCAGATCG CCGCCGCTCG CGCCGCGCTC GATCCCAAGA TCGATACCTC GCGGTTCGAA
ACGCCGCGGA TCGCCGATAT CCTGTCACAG CCGAACGCCG AGCAACTGGT GCGCGGCATG
CGGCTGAATG CCGAAACCCA CACGCTGCTG CCGAACAATG TCGGCAACGA TCTGAATTGC
AGCTCGTGTC ACCTCAACGC CGGCACCGTC GCCGACGGCA GCCCCTATGT CGGCGTCGCA
GCATTCTTCC CGAGCTACGC GCCGCGCGCC GGCCGCGTCA TCACGCTGGA GGACCGCATC
AATGGCTGCT TCCTGCGCTC GATGAACGGC AAGCCACTGC CGGTCGACGG CCCCGACATG
AAAGCGATGG TCGCTTATTT CGACTGGATG CAGGGCTCGA CCAAGCCGGA GGATAAGGTC
GCCGGCCGCG GCGTCGGCAA GGTCGATCAG TCGCTGGTGC CCAATCTCGA CAACGGCAAG
GAGATCTACA CGGCGCGCTG CGCGGTGTGT CACGGCGACA ATGGCGAAGG GCTGAAGGAC
GCCGCCGGCC GTGTGGTGTA CCCGCCGCTG TGGGGACCGC GCTCGTTCAA TATCGGCGCC
GGAATGGCCC GGACCTACAC CGCGGCCGCT TTCGTCAAGC GCAACATGCC GATCGCGAGC
CACAACAAAT TCCCGCTCGG CCAGGGTGAG CTGTCCGATC AGGAAGCGGT CGACGTCGCG
GCGTACTTCA CCCACATGGA ACGGCCGGAT TTTCCCGGCA AGGTGAAGGA CTGGCCGAAG
GACCAGAAGC CGAAGGACGC GCGCTACTGA
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| Protein sequence | MSHSRGRTAK TLAFLAASAL VVIGGVALWI IQPPAVDANL KAVDAQVDPE LIKRGEYIAR
AGDCVACHTA PGGTPMAGGL KLDTPFGSLW STNITPDRAT GIGSWSFGEF DRAMRKGVAA
DGHNLYPAMP YPSYAKISSD DMVALWAYLT KGLAPVAQAN RAPEMSFPFN MRIGLAFWNV
AFLDASPFKP EPNQDAVWNR GAYLVQGLGH CGACHTPRGI AFQEKAMSDA GPHGRDYLAG
AKVENWNALN LRGLWTVPDT VQMLKTGQNR FATAAGGMTD VIRHSTQHMT DQDLTAIATY
LKALPTDRPA PAAAVAEVPA STYTTAGGLG YTQFCADCHR ADGAGVPGVF PPLAGNPTIA
AKDPATLVHI TLTGWETTAT TAHPRVWTMP SFARLNDREI ADILSFVRAN WGGNASAVTA
EQIAAARAAL DPKIDTSRFE TPRIADILSQ PNAEQLVRGM RLNAETHTLL PNNVGNDLNC
SSCHLNAGTV ADGSPYVGVA AFFPSYAPRA GRVITLEDRI NGCFLRSMNG KPLPVDGPDM
KAMVAYFDWM QGSTKPEDKV AGRGVGKVDQ SLVPNLDNGK EIYTARCAVC HGDNGEGLKD
AAGRVVYPPL WGPRSFNIGA GMARTYTAAA FVKRNMPIAS HNKFPLGQGE LSDQEAVDVA
AYFTHMERPD FPGKVKDWPK DQKPKDARY
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