| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2212 |
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| Symbol | |
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| ID | 6409872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2397237 |
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| End bp | 2398793 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712096 |
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| Product | hypothetical protein |
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| Protein accession | YP_001991208 |
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| Protein GI | 192290603 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.976757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTGAGG GGATGAACGG CGCGCAGTCA GTGGTGCGGA CGCTGGTGAA CTGCGGCGTT
GAGGTGTGTT TCGCAAATCC GGGCACTTCG GAAATGCACT TCGTCGCGGC GCTGGATTCG
GTCAGCGGGA TGCGGCCGGT GCTGTGTCTG TTCGAGGGCG TGGTCACCGG CGCCGCCGAT
GGCTACGGCC GGATCGCCGG CAAGCCGGCC GTGAACCTGC TGCATCTCGG TCCCGGCCTC
GCCAACGGCC TTGCCAATCT GCACAACGCC CGCCGCGCCG CGACGCCGAT CGTCAACATC
GTCGGCGACC ACGCCGCCTA TCACCTGCAA TACGACGCGC CGCTCACCTC CGACATCGCC
GGCTTTGCCC GGCCGGTGTC GAGCTGGATC CATGAATCCA AGAGTGCCGG CGCGGTGGCG
AGCGATACGG CGCGCGCGGT GCAGGCCGCC TGCGCGGCGC CGGGCGGCAT CGCCACGCTG
ATCATGCCGG CGGATGTCGC CTGGAATCCG GCCGCGCGCG CGGCGCAGAA GCTGCCGGAG
ATCGGTCCGG CCAAGGTTGC GGCCGAGACC GTCGAGGCGA TCGCCAAGCT GCTCGCGAAC
GGCAAGAAGT CGGCGCTGCT GCTGCGCGGA TCGGCGCTGC TCGGCGATGC GCTGGAGGCG
GCCGGACGGG TCGCAGCCAA GACCGGCGTG CGGCTGCTGT GCGACACCTT CGCGCCGCAG
ACCGAACTCG GTGCTGGCCG GGTGCCGCTG GAACGCATCC CGTATTTCTC GGAGCAGATC
ACCGCATTCC TCAAAGACGT CGAGCAACTG ATCCTGGTCG GCGCCAAGCC GCCAGTGTCG
TTTTTCGCCT ATCCTGGCAA GCCGAGTTGG GGCGCGCCGG ATGGTTGCCT GATCGATTAT
CTGGCGCAGC CGCATGAAGA TGGCGCACAG GCGGTGAAGG ATCTCGCCGC CGCGGTTGAT
GCACCGGCCG AGCCCGCCGC CCGCACTCAG CTGGTGTTGC CCGAGCTGCC GAAGGGGAAG
CTCAATTCGC TCGGCGTCGC GCAAGCGATT GCGCATCTGA CGCCCGACCA TGCGATCTAC
GCCGAGGAGG CCAACACCTC CGGCCTGCCG TTCCAGATGA TCCTGCCCAA GGCACGGCCG
CACACCCATC TGCCGCTGAC CGGCGGTTCG ATCGGGCAGG GGCTGCCACT CGCGATCGGC
GCGGCGATCG CTGCGCCGGA TCGCAAGGTG GTGTGCCCGC ACGGCGATGG CGGCGCTGCC
TACACGATGC AGGCGCTATG GACGATGGCG CGCGAGAAGC TCGACGTCAC CGTGGTGATC
TACGCCAACC GGTCCTACGC GATCCTCAAC ATCGAACTGC AGCGGGTCGG CGCCTCCGGC
GCAGGCGCCA ATGCGCTGTC GATGCTCGAT CTGCACAATC CGGAAATGAA CTGGATGAAG
ATCGCCGAAG GTCTCGGCGT CGAAGCCAGC CGTGCCACCA CCGCGGAGGA ATTCTCCGCG
CAATATGCTT CGGCGATGAG TCAGCGCGGT CCGCGGCTGA TCGAAGCCTT GATCTGA
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| Protein sequence | MGEGMNGAQS VVRTLVNCGV EVCFANPGTS EMHFVAALDS VSGMRPVLCL FEGVVTGAAD
GYGRIAGKPA VNLLHLGPGL ANGLANLHNA RRAATPIVNI VGDHAAYHLQ YDAPLTSDIA
GFARPVSSWI HESKSAGAVA SDTARAVQAA CAAPGGIATL IMPADVAWNP AARAAQKLPE
IGPAKVAAET VEAIAKLLAN GKKSALLLRG SALLGDALEA AGRVAAKTGV RLLCDTFAPQ
TELGAGRVPL ERIPYFSEQI TAFLKDVEQL ILVGAKPPVS FFAYPGKPSW GAPDGCLIDY
LAQPHEDGAQ AVKDLAAAVD APAEPAARTQ LVLPELPKGK LNSLGVAQAI AHLTPDHAIY
AEEANTSGLP FQMILPKARP HTHLPLTGGS IGQGLPLAIG AAIAAPDRKV VCPHGDGGAA
YTMQALWTMA REKLDVTVVI YANRSYAILN IELQRVGASG AGANALSMLD LHNPEMNWMK
IAEGLGVEAS RATTAEEFSA QYASAMSQRG PRLIEALI
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