| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2211 |
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| Symbol | |
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| ID | 6409871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2395457 |
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| End bp | 2397055 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712095 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001991207 |
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| Protein GI | 192290602 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCG AACGTCTCTA TCTCTACGAC ACCACGCTGC GTGACGGCGC CCAGACCAAC
GGCGTCGACT TCACCTTGCA CGACAAGAAG CTGATCGCCT CGCTGCTCGA CGATCTCGGC
ATCGATTATG TCGAGGGCGG CTATCCGGGC GCCAATCCGC TCGATACCGA GTTCTTCGGC
ACGGAACAGA AGCTGGAGCG CGCCACCTTT GCGGCATTCG GCATGACCCG GCGGCCCGGC
CGCTCGGCCT CGAACGATCC CGGCATCGCG ATGCTGATCG ACGCCAAGGC GGATGCGATC
TGCTTCGTCG CCAAGTCGTC GGAGTATCAG GTCCGGGTCG CGCTCGAGAC CACCAACGAG
GAGAACGTCG CCTCGATCCG CGACAGTGTC TCGCTCGCCA AGGACAAGGG CCGCGAGGTG
CTGGTCGATT GCGAGCACTT CTTCGACGGC TACAAGGCCA ATCCGGAGTT CGCGCTGCAA
TGCGCCAAGG CGGCCTATGA GTCCGGCGCC CGCTGGGTGG TGCTGTGCGA CACCAATGGC
GGCACCATGC CGGACGAGGT CGAAGCCATC GTCGGCGAAG TCGTCAAGCA CATCCCCGGC
GCGCATGTCG GCATTCACGC GCATAACGAC ACCGAGCAGG CGGTCGCGAA TTCGTTCGCC
GCGGTGCGCG CCGGCGCGCG GCAGATCCAG GGCACGCTGA ATGGCCTCGG CGAACGCTGC
GGCAACGCCA ATCTGTGCTC GATGATCCCG ACGCTGAAGC TGAAGAAGGA ATTCGCCGAC
AAGTTCGAAA TCGGCGTCTC CGACGACAAG CTGGCGAGCC TGGTGCAGGT GTCGCGCGCG
CTCGATAACA TTCTCGACCG CGCACCCAAC CCGCACGCGC CCTATGTCGG CGGCAGCGCT
TTCGTCACCA AGACCGGCAT CCACGCGTCG GCGGTGCTGA AGGATCCGCA GACCTATGAG
CACGTGCCGC CGGAGTCGAT CGGCAATCAT CGCAAGGTGC TGGTGTCGGA TCAGGCCGGT
AAGTCGAACG TGCTGGCCGA ACTGGCGCGC ACCAACATCC AGTTCGACCG CGACGATCCG
CGGCTGTCCC GCCTGGTCGA GAAGCTGAAG GAGCGCGAAG CGGCCGGCTA CGCTTACGAG
TCGGCCAACG CTTCGTTCGA TCTGCTCGCG CGCAGCACGC TCGGCACCGT GCCGGAGTTC
TTCCGGGTCG ACAAGTTCGA CGTCAATGTC GAGCAGCGCT ACAACTCGCA CGGCCAGCGC
GTGACCGTGG CGATGGCGGT GATCAAGGTC GAAGTCGACG GCGAGACGCT GATCTCGGCC
GCCGAAGGCA ACGGCCCGGT CAACGCGCTC GACGTCGCGC TGCGCAAGGA TCTCGGCAAG
TACCAGAAGT ACATCGAGGG CCTGAAGCTG GTCGATTACC GCGTTCGTAT CCTCAATGGC
GGCACCGAGG CCGTGACTCG GGTGCTGATC GAGAGCGAGG ACGAGGACGG CCGGCGCTGG
ACCACGATCG GCGTGTCGCC GAACATCATC GACGCCTCGT TCCAGGCGCT GATGGATTCG
GTCGTTTACA AGCTGGTGCA GTCGAACGCG CCGGTGTGA
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| Protein sequence | MSRERLYLYD TTLRDGAQTN GVDFTLHDKK LIASLLDDLG IDYVEGGYPG ANPLDTEFFG
TEQKLERATF AAFGMTRRPG RSASNDPGIA MLIDAKADAI CFVAKSSEYQ VRVALETTNE
ENVASIRDSV SLAKDKGREV LVDCEHFFDG YKANPEFALQ CAKAAYESGA RWVVLCDTNG
GTMPDEVEAI VGEVVKHIPG AHVGIHAHND TEQAVANSFA AVRAGARQIQ GTLNGLGERC
GNANLCSMIP TLKLKKEFAD KFEIGVSDDK LASLVQVSRA LDNILDRAPN PHAPYVGGSA
FVTKTGIHAS AVLKDPQTYE HVPPESIGNH RKVLVSDQAG KSNVLAELAR TNIQFDRDDP
RLSRLVEKLK EREAAGYAYE SANASFDLLA RSTLGTVPEF FRVDKFDVNV EQRYNSHGQR
VTVAMAVIKV EVDGETLISA AEGNGPVNAL DVALRKDLGK YQKYIEGLKL VDYRVRILNG
GTEAVTRVLI ESEDEDGRRW TTIGVSPNII DASFQALMDS VVYKLVQSNA PV
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