Gene Rpal_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2195 
Symbol 
ID6409855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2377849 
End bp2378358 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID642712079 
Producthypothetical protein 
Protein accessionYP_001991191 
Protein GI192290586 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC TGTCGAAGGC ATTGCTGGCC GCCGCGTTGG TGTTCGGTGT CGCTCTGGTC 
GGCCATCAGG CTCAGGCGCA GACCAAGCAG CCGTCGCCGG CCGCGATCGC GTCCGCCAAG
GAGATCCTTG AGCTGAAGCG GGCCGGCGGC ATCTACGCCC AGGCGGTGCC GAACATCATT
CAGCGCACCA TGGACACGCT GATGCAGAGC AACCTGAACT ATCAGCAGGA CCTCAAGGAG
GTCGCGGTGG TGATCGCCAA GAAGCTGGCG GGCCGCGAGA AGGAAATCGG TGACGGCATG
GCGAAGATCT ACGCCACGGA TTTCACCGAG CAGGAGCTCA AGGACCTGGT CACCTTCTAC
AAGTCGCCGC TCGGCCAGAA GCTGCTCACC CAGGAGCCGA AGTCGATTGC CGAAAGCATG
CAGTTCATGA ATCAGTGGGC GCAGAAGTTC GCCGAGGAAG TGAACGGCGA ATTCCGCGCC
GAGATGCGTA AGCGCGGCAA GAACATCTGA
 
Protein sequence
MKYLSKALLA AALVFGVALV GHQAQAQTKQ PSPAAIASAK EILELKRAGG IYAQAVPNII 
QRTMDTLMQS NLNYQQDLKE VAVVIAKKLA GREKEIGDGM AKIYATDFTE QELKDLVTFY
KSPLGQKLLT QEPKSIAESM QFMNQWAQKF AEEVNGEFRA EMRKRGKNI