| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2183 |
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| Symbol | |
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| ID | 6409843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2365480 |
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| End bp | 2366016 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712067 |
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| Product | putative exported protein of unknown function |
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| Protein accession | YP_001991179 |
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| Protein GI | 192290574 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.546287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCG TGTTGCTGGT GCTATTGGTG CTGATTGGCA CCGCCGGCGC AGTGGTCGCC
TATGGCGATC CGAAAAGGAT CGCAGAGGCC GGCGACGCGA TGTCGACGAT GCTGAAGAAG
CGCGTCGCCG CTGCCACGGC TGCCGCGGAG GCAGCCAAAG CCCGCACGGT CGAAATCCCG
CGCGGCACCG GCGGGGAGTT CGCGGTGAGC GCCAAGGTCA ACGGCGTCGC GGCGCCGATG
GTGATCGACA CCGGTGCGAC CTCGGTGGTG CTGACTTACG AGACCGCCAA GGCTGCCGGC
CTGCCGCTGG AGCTGCTGAA CTTCAACGTC GAACTGGAAA CCGCCGGCGG CCACACCCGC
GCGGCGCGGC TGTCGCTCAA CACCCTGGCG ATCGGCAAAC TGGTCGAGCG CTCCGTCCCG
GCCCTGGTGG TGCCACGCGG CCAGATGAAG ACCAACCTTC TCGGCATGAG CTTCCTCGAC
CGCCTCGAAA GCTGGGAAGT CCGCTCCGAC CAACTCCGGC TGCGCGGCTA TCCCTAG
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| Protein sequence | MSRVLLVLLV LIGTAGAVVA YGDPKRIAEA GDAMSTMLKK RVAAATAAAE AAKARTVEIP
RGTGGEFAVS AKVNGVAAPM VIDTGATSVV LTYETAKAAG LPLELLNFNV ELETAGGHTR
AARLSLNTLA IGKLVERSVP ALVVPRGQMK TNLLGMSFLD RLESWEVRSD QLRLRGYP
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