Gene Rpal_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2177 
Symbol 
ID6409837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2358399 
End bp2359031 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID642712061 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001991173 
Protein GI192290568 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.480454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGGG TTCGGACGGA AGCCAAGCGG GACGCGATCC TCGACACGGC GGCCGAGGTG 
TTTAAGGAAC GCGGCCTCGA AGGCGCTTCG ATGTCGGAAA TCGCCAGCAG GCTCGGCGGC 
TCGAAAGCGA CGCTGTACGG CTACTTCCCG TCCAAGGAAG AACTGTTCGT ACACGTCGCG 
CTGCGCGTTG CAGGCAAGCA GATCCTCGGC ATGTACGAAA ATCTCGAGGC GCGCGCCACC 
GACGATCCGG AGCGCGTGCT CACCGAGTTC GGCAAGAAAC TACTGCATCG CGTGCTGGTC 
GAGGACGCCA CCACTGCCCA CCGCCTTGCG GTGGCGCACG GACGGATCGG CAATCTCGGT 
CGGATTTTCT ACGACGCGGG TCCTGGCAAA GCGGTCGAGG CGTTCACCCG CTATATCGAC 
GCCGCAACCA AAGCTGGCCG CCTACATGCT GCCAATCCGG GTGCGGCGGC GCATCACCTG 
TTGGCGCTAC TCGAATCCGA GATCGCTTAT CGCCGCAGGC TGCAATTTGA CGACGCCATC 
TCCGCCAGCG AGATCGATCA ATGCGTCGGC CGTGCCGTCA CGGTGTTCCT GGCTGCCTAC 
GCGGCGCCGC GAACGAGCGA CAAAGCGTCC TGA
 
Protein sequence
MVRVRTEAKR DAILDTAAEV FKERGLEGAS MSEIASRLGG SKATLYGYFP SKEELFVHVA 
LRVAGKQILG MYENLEARAT DDPERVLTEF GKKLLHRVLV EDATTAHRLA VAHGRIGNLG 
RIFYDAGPGK AVEAFTRYID AATKAGRLHA ANPGAAAHHL LALLESEIAY RRRLQFDDAI 
SASEIDQCVG RAVTVFLAAY AAPRTSDKAS