| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2174 |
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| Symbol | |
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| ID | 6409834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2354312 |
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| End bp | 2355502 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712058 |
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| Product | Patatin |
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| Protein accession | YP_001991170 |
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| Protein GI | 192290565 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0775647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCG TGCCTCGTTC CATGGTCGTC GTTTTCGTGC TGGCATCGAG CTGTTGGCTT
GCCGCATGCG CGAGCCTGCC GCGCGTGCCG TACACCGCCA CCGAAGCCGC GCAGGCGCGC
GTGCTCGATC GCGACGATTT GCGCCGCTAC GCCGACGATC CACCCTCAGC GTTTCGCGTC
ACGCGGATTG CCGGTCCGCA GACCTATCTG GCGTTATCCG GTGGTGGCGC CGACGGAGCC
TACGGTGCCG GCGTGCTGGC GGGGTGGACC GCAGCCGGGC ACCGGCCCTC ATTCTCGCTC
GTATCCGGCG TCAGCACCGG TGCGCTGATC GCGCCATTCG CGTTCCTCGG CTCGCGTTAC
GACGACACCT TGCGCGAGCT CTACACCAGC GGCGTCGCCG AAAGCCTGCT CGAGGATCCG
AACCCGCTCA ACGCGATCTT CGGCTCGGGG CTGTTCGGCA ACAAGCGGCT GCGCGAACTG
GTCGCCCGCT ATATCGATGC CGACTTCATG GCGGAGGTGG CCGAGCAATA CGCCAAGGGG
CGGATGCTGT TCGTGGTCAC CACCAATCTG GATTCGCAGC GGTCGGTGAT CTGGGACATG
GGCCGGATCG CCTCGTTGCG CACGTCGGAG AGCCTCAATC TGTTCCGGGA TGTCGTCGCT
GCTTCTGCAA GCATTCCGGC GGTGTTCCCG CCGATGCTTG TCAATGCCGA GGCCAACGGC
GCTCGGTTCC AGGAGATGCA TGTGGATGGC GGCGTGATGT CGCCGGTGCT GACCTTGCCC
GAGGCGTATT TGATGCGTAG TGCGTCCTGG GACAAGCCGC TGAACCTGCA ACTCTACATC
CTGATGAACA ATACCATCGA ACCGGAGTTC CAGCTCGTGC GCGATCGCGC GCTGGACATC
GCTGCACGGT CGTCGTCATC GATGATCAAA GCGCAGACCC GGTCGATTCT CTACAGCACC
TACGCGTTCG CACGCCGTAA CAAGTATGGC TTCCACCTGA CCTATATCGA GAGCAATCGG
CCGCCGTCGC CGCCCGGCTT CGACACCGCC TACATGCGGT CGCTGTATCA GTACGGTTAC
GACCGCGCTC GCAGCGGCAA TGTCTGGTCG AGCGCGCCGC CGGCCAGTGA AACGGTGCCG
AGCCCGATTG CGACCACCAC TCCGGCACCG CACGTGGCCG GTGTTCAGTA A
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| Protein sequence | MSRVPRSMVV VFVLASSCWL AACASLPRVP YTATEAAQAR VLDRDDLRRY ADDPPSAFRV
TRIAGPQTYL ALSGGGADGA YGAGVLAGWT AAGHRPSFSL VSGVSTGALI APFAFLGSRY
DDTLRELYTS GVAESLLEDP NPLNAIFGSG LFGNKRLREL VARYIDADFM AEVAEQYAKG
RMLFVVTTNL DSQRSVIWDM GRIASLRTSE SLNLFRDVVA ASASIPAVFP PMLVNAEANG
ARFQEMHVDG GVMSPVLTLP EAYLMRSASW DKPLNLQLYI LMNNTIEPEF QLVRDRALDI
AARSSSSMIK AQTRSILYST YAFARRNKYG FHLTYIESNR PPSPPGFDTA YMRSLYQYGY
DRARSGNVWS SAPPASETVP SPIATTTPAP HVAGVQ
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