| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2172 |
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| Symbol | |
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| ID | 6409832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2350947 |
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| End bp | 2353997 |
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| Gene Length | 3051 bp |
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| Protein Length | 1016 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712056 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001991168 |
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| Protein GI | 192290563 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.244345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTCGT TCAATCTCTC CGACTGGGCG CTGCAGCACC GTTCGCTCGT CTGGTACTTC
ATGATCGCCT TCATGGCGGC CGGTCTGTTC TCGTATCTCG ACCTCGGCCG CGAAGAAGAT
CCGGCGTTCA CCATCAAGAC CATGGTGATC CAGGCGAAGT GGCCCGGAGC TTCGGCGGAG
GAGACCACCC GGCAGGTCAC CGACCGGATC GAGAAGAAGC TCGAGGAGCT GGAGTCGCTC
GACTACACCA AGAGCATCAC CACGCCGGGC GAAACCACGG TGTTCGTCAA TCTGCGCGAC
ACCACCAAGG CGCGCGACGT GCAGCCCACT TGGGTGCGCG TGCGCAACAT GATCAACGAC
ATCAAGGGCG ACTTTCCGCA GGGCGTGGTC GGCCCCGCCT TCAACGATCG CTTCGGCGAC
GTGTTCGGCA ACATCTATGC GTTCACCAGC GACGGCCTGA CCCAGCGCCA GCTCCGCGAC
AAGGTCGAGG AAGTCCGCGC CAAGGTGCTG CAGGTGCCAA ATGTCGGCCG CGTCGACATC
GTCGGCGCGC AGGACGAAGT GATCTTCCTC GAATTCTCCC CGCGCAAGGT GGCGGCGCTC
GGCCTCGACC AGCGCACCAT CGTCAGCTCG CTGCAAGCCC AGAACGCGAT CGCGCCGTCG
GGCGTGCTGC AGGCCGGGCC GGAGCGGATC AGCGTCCGTG TCAGTGGCCA GTTCACCTCC
GAAGAAAGCC TCAAGGCGAT CAACCTGCGG GTCAACGATC GCTTCTTTCC GCTGACCGAC
GTCGCCACCA TCCGCCGCGG CTATGTCGAT CCGCCGACCT CGCTGTTCCG CTTCAATGGC
GAGCCGGCGA TCGCGCTGAC GATCGGCATG AAGGCGGGCG CAAACCTGCT GCAGTTCGGC
GAGGCGCTGA AAGAGGAGAT GAAGCGTATC TCCGCCGATC TGCCGGTCGG CGCCGAGGTG
CATCTGGTGT CGGACCAGCC GCAGATCGTC GACGAGGCGG TGTCCGGCTT CACCCGGGCG
CTGTTCGAGG CGGTGGCGAT CGTGCTGGTG ATCAGCTTCA TCAGCCTCGG CATGCGCGCC
GGCCTGGTGG TTGCGATTTC GATCCCGCTG GTGCTGGCGA TCACCTTCAT GGTGATGTCG
TATTCCGGGA TCTCGCTGCA GCGGATTTCG CTGGGCGCGC TGATCATCGC GCTCGGCCTG
CTGGTCGACG ACGCGATGAT CGCGGTCGAG ATGATGGTGG CGCGGCTGGA GGTCGGCGAC
TCGCTCGCCA AGGCCGCGAC CCATGTCTAC ACCTCGACGG CGTTCCCGAT GCTGACCGGC
ACGCTGGTGA CGGTGGCGGG CTTCATTCCG ATCGGTCTCA ACAACAGCGC GGCGGGCGAA
TTCACCTTCA CGCTGTTCGT GGTGATCGCG GTGTCGCTGC TGACGTCGTG GATCGTCGCG
GTGCTGTTCA CGCCGCTGCT CGGCGTCACC ATCCTGCCCG ACAAGATGAA GCACCATCAC
GAGACCAAGG GCCGGTTTGC GTCGATGTTC AGCGGGACGC TCGGCTTCTG CATGCGGCAT
CGCTGGCTGA CGATCGGATT GACGCTGGCG GCTTTCGCGC TGTCGCTGGT CGGCATGGGC
TTCGTGCAGC AGCAATTCTT CCCGAATTCC GACCGCAAGG AACTGATCGT CGACTGGAAT
CTTCCGCAGA ACAGCTCGAT CGCCGAGACC AATGCGCAGA TGGCCAAGTT CGAGCGCGAG
GCGCTGACGG GACGGCCGGG GATTGATCAC TGGTCGACCT ATGTGGGGCA GGGCGCCCCG
CGTTTCGTGC TGTCGTTTGA TGTCGAACCG TCGAATGCGA CCTTCGGCCA GATGGTGATC
GTGACCAAGA GCCTCGCCGA CCGCGACCGG TTGCGCCAGG AGCTGCAGGC TTACTTGCGC
AAGACCTTCC CGGGCACCGA CGCGCTGGTG AAGTTGCTCG ACATCGGCCC GCCGGTCGGA
CGGCCGGTCC AGTATCGCGT CAGCGGGCCG GATATCTCCA AGGTGCGAGG CTTTGCGCAG
CAACTCGCCG GCATCGTCGC CGCCAATCCC CATCTCGGCG AAGTGGTGTT CGACTGGATG
GAACCGGCGC GGGTGATCAA GGTCGACGTG CTGCAGGACA AGGCGCGTCA GCTCGGGGTC
ACCTCGGAAG ACATCGCCTC GACGCTGAAC GGCATCCTCG ACGGTGCGAC CATCACCCAG
GTGCGTGACG ACATCTATCT CGTCAACGTG CTGGGGCGAG CCAACGACGC CGAGCGCGGA
TCGATCGAGA CGCTGCGCAA CCTGCAACTG TCCGGCGGCA GCGGCCAGAC CGTGCCGCTC
GCCGCGGTCG CGACCTTCCG CTACGAGCTG GAGCAGCCGA CGATCTGGCG CCGCGCGCGG
CTGCCGACCG TCACGGTCAA GGCCAGCGTC ATCGACGAGG TGCAGCCGGC GACGGTGGTG
GAGCAGTTGA AGCACTCGGT CGGCGAGTTC ACCGCCAAAC TGCCGGTCGG CTATTCGGTG
ACCGTCGGCG GCGCGGTCGA AGAGAGCGGC AAGTCGCAGG CGCCGATCAT CGCGGTGGTG
CCGATCATGC TGTTCGTGAT GGCGACCGTG CTGATGATCC AGCTGCAGAG CTTCCATCGA
CTGTTCCTGG TGTTCGCGGT GGCGCCATTG GCTCTGATCG GCGTGGTCGC AGCGCTGCTG
CCGAGCCGTG CGCCGCTCGG CTTCGTCGCC ATCCTCGGCG TTCTGGCGCT GATCGGCATC
CTGATCCGAA ACTCGGTGAT CCTGATCGTG CAAATCGAAC AGTTGCGCAG CGAGGGACGC
CCACCATGGG ATGCGGTGGT GGAGGCGACC GAGCACCGAA TGCGGCCGAT CATGTTGACC
GCAGCCGCGG CGAGCTTGGC GCTGATCCCG ATCGCGCGTG AAGTGTTCTG GGGACCGATG
GCCTACGCGA TGATGGGCGG CATCATCGTC GGCACGGTGC TCACCCTGTT GTTCCTGCCA
GCGCTTTACA TTGCGTGGTT CCGCATCAAG GCGCCGACAC AAGAGGCTTA G
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| Protein sequence | MKSFNLSDWA LQHRSLVWYF MIAFMAAGLF SYLDLGREED PAFTIKTMVI QAKWPGASAE
ETTRQVTDRI EKKLEELESL DYTKSITTPG ETTVFVNLRD TTKARDVQPT WVRVRNMIND
IKGDFPQGVV GPAFNDRFGD VFGNIYAFTS DGLTQRQLRD KVEEVRAKVL QVPNVGRVDI
VGAQDEVIFL EFSPRKVAAL GLDQRTIVSS LQAQNAIAPS GVLQAGPERI SVRVSGQFTS
EESLKAINLR VNDRFFPLTD VATIRRGYVD PPTSLFRFNG EPAIALTIGM KAGANLLQFG
EALKEEMKRI SADLPVGAEV HLVSDQPQIV DEAVSGFTRA LFEAVAIVLV ISFISLGMRA
GLVVAISIPL VLAITFMVMS YSGISLQRIS LGALIIALGL LVDDAMIAVE MMVARLEVGD
SLAKAATHVY TSTAFPMLTG TLVTVAGFIP IGLNNSAAGE FTFTLFVVIA VSLLTSWIVA
VLFTPLLGVT ILPDKMKHHH ETKGRFASMF SGTLGFCMRH RWLTIGLTLA AFALSLVGMG
FVQQQFFPNS DRKELIVDWN LPQNSSIAET NAQMAKFERE ALTGRPGIDH WSTYVGQGAP
RFVLSFDVEP SNATFGQMVI VTKSLADRDR LRQELQAYLR KTFPGTDALV KLLDIGPPVG
RPVQYRVSGP DISKVRGFAQ QLAGIVAANP HLGEVVFDWM EPARVIKVDV LQDKARQLGV
TSEDIASTLN GILDGATITQ VRDDIYLVNV LGRANDAERG SIETLRNLQL SGGSGQTVPL
AAVATFRYEL EQPTIWRRAR LPTVTVKASV IDEVQPATVV EQLKHSVGEF TAKLPVGYSV
TVGGAVEESG KSQAPIIAVV PIMLFVMATV LMIQLQSFHR LFLVFAVAPL ALIGVVAALL
PSRAPLGFVA ILGVLALIGI LIRNSVILIV QIEQLRSEGR PPWDAVVEAT EHRMRPIMLT
AAAASLALIP IAREVFWGPM AYAMMGGIIV GTVLTLLFLP ALYIAWFRIK APTQEA
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