| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2171 |
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| Symbol | |
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| ID | 6409831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2349877 |
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| End bp | 2350950 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712055 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991167 |
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| Protein GI | 192290562 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.434682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC CACGTTTCGT TGCGGTGATC GCGGCTGCGC TGCTGCTGAC AGGCTGCAAC
GACAAGTCGG AAACCAAGCC CACGGTGCGG CCGGTGATGT CGACGGTGAT TGCGCCGCTG
CAGGCGACCA ATCTCGCCGT GGTCGGCACC GTCGAGCCGC AATTCAAGAC CGACTACGGC
TTTCGCATGC TCGGCCGGCT GATCGCCCGT CCCGTCAATA TCGGCGACGT GGTGGAGAAG
GGGCAGACGC TGGCGGCGGT CGATCCGTTC GCGGCTGAGC TCGCGGTGCG CTCGGCGCAG
GCCGATCTGG CGACCGCGCA GGCGCAGCTG GTCAATGCCA GCGGCACCGC CAACCGGCAA
CGCGCGCTGA TCGAGACCGG CGCCACCACC AAGGCGACGC TGGATAGTGC CGAGCAGGGC
GACGCCGCGG CGCAGGCTGC GGTTGTGCGC GCCCAGTCGG CGCTGACCAA GGCGCGCGAG
CAACTGAGCT ACACCAAGAT CGAAGCGCAA TATGCCGGCG TCGTCACCGC CGTCGGTGCG
CAGGTCGGTC AGGTCGTCAA TCCCGGCCAG ATGGTTGCGA CCGTCGCGCG GCCCGACATT
CGCGAGGCGG TGATCGATGT CGCTGAGGAT CTCGTCAGTG TGTTGAAGAT CGGCGCGCCG
CTCACCGTGG CGCTGCAGCT CGATCCGCGC GTCCGCGTCG ACGGCAAGGT GCGGGAGATC
GCGCCGCAGG CCGATCAGGT CACGCGCGCA CGGCGGGTTC GCATCACGCT GGAAAATCCG
CCGGAGACGT TCCGGCTCGG CACCACGATC ACCACGCTGA TTCCCGGCAA GCCGAGCCGC
GGCTTCCGCC TGCCGGCCAC CGCGATCCTG CGCCAGGGCG ATCAGGCCAG CGTGTGGGTG
ATCGACACCG CCAAGGGATC GGTCAGCAAG CGCAACGTGC AGGTCGCGCC GAGCGACAAC
GGTACGGCTC AGGTCACCGA TGGGCTCGAA GCCGGCATGC GGATCGTCAC CGCCGGCGTC
CATCATCTGC AGGAAGGCCA AATGGTCCGG TTCGAACGGG AAGTCACTCC GTGA
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| Protein sequence | MSAPRFVAVI AAALLLTGCN DKSETKPTVR PVMSTVIAPL QATNLAVVGT VEPQFKTDYG
FRMLGRLIAR PVNIGDVVEK GQTLAAVDPF AAELAVRSAQ ADLATAQAQL VNASGTANRQ
RALIETGATT KATLDSAEQG DAAAQAAVVR AQSALTKARE QLSYTKIEAQ YAGVVTAVGA
QVGQVVNPGQ MVATVARPDI REAVIDVAED LVSVLKIGAP LTVALQLDPR VRVDGKVREI
APQADQVTRA RRVRITLENP PETFRLGTTI TTLIPGKPSR GFRLPATAIL RQGDQASVWV
IDTAKGSVSK RNVQVAPSDN GTAQVTDGLE AGMRIVTAGV HHLQEGQMVR FEREVTP
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