| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2170 |
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| Symbol | |
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| ID | 6409830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2348792 |
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| End bp | 2349880 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712054 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991166 |
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| Protein GI | 192290561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.923896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAAT TCTTGATGCT TTGGCTCAGA CCCGTGGTGC TGCTGATGGT TGCCGCCTCC
CTGGCGGGGT GCGGCGAGGA GGCCCGGCGG GAACGCCCGG TGACGCTGGT GAAGACCGCG
GTGGTCCACA CCCAGCCCCG CAGCACGGTC ATTCGGCTGA CCGGCGACGT TCAGGCCCGG
GTGTCGACCG AATTGTCGTT CCGGGTCAGT GGCCGAGTGG TCGAGCGCCT GGTCGACGTC
GGTGCCCACG TCAATGCCGG CGATCTGCTG GCGCGGCTCG ATCCGACTGA ACAACGCGCC
GATCTGATTG GCGCCCAGGC GGCGCTGACC GCCGCCGAAG CCCAGCTCCG TCTTGCCACC
GCAACCTACG AACGCCAGAA GACGCTGATG GCGTCGGGCT TCACCACCCG CGTCGCCTAC
GATCAGGCGC AGGAGGGGCT GCGCGCGGCC GAAGGTTCGG TCGACACCGC CAAGGCGCAA
CTCGGCATCG CCAAGGATGC GCTCGGCTAC ACCGAGCTGC GCGCCAGCGC CGCCGGCATC
ATCACCGCAC GCAATATCGA GGTCGGTCAG GTCGCGCAGT CGGCGCAGTC GGCCTACACG
CTTGCCGAAG ACGGCGCACG GGACGCGGTG TTCGACGTCT ATGAGGCAAT CTTCCTGATC
CCGGTCGGCA GCGATTCCAT CAAGCTGTCG CTGGTGTCGA AGCCGGCGAT TACGGCCGTG
GCCAAGCCGC GCGAAATCTC GCCGACCGTC GATCCGAAAA CCGGTTCGGT CCGCGTCAAA
TTTTCGATCG AAAACCCGCC GCCCGAGATG ACGCTCGGCA GCGTCGTGGT CGGGGAAGGC
TTCAGCCAGA CGCGCGACAA GATCGTGCTG CCATGGAGCG CGCTGACCGC CGATCAGAGC
GGCGCCGCGG TGTGGGTGGT GGATCCGAAG ACCCATACCG TGTCCCTCAA GAGCGTCGCG
ATCGAACGCT ACGAGACCGA CGCGATCGTG GTCAGTCGCG GCCTGTCCAT CGGCGATCGC
GTCGTGGTCG ACGGCGGAAA GATGTTGCGT CCCGGACAAG TCGTCGCCGA TGCGGGAGGC
GCCGCATGA
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| Protein sequence | MGEFLMLWLR PVVLLMVAAS LAGCGEEARR ERPVTLVKTA VVHTQPRSTV IRLTGDVQAR
VSTELSFRVS GRVVERLVDV GAHVNAGDLL ARLDPTEQRA DLIGAQAALT AAEAQLRLAT
ATYERQKTLM ASGFTTRVAY DQAQEGLRAA EGSVDTAKAQ LGIAKDALGY TELRASAAGI
ITARNIEVGQ VAQSAQSAYT LAEDGARDAV FDVYEAIFLI PVGSDSIKLS LVSKPAITAV
AKPREISPTV DPKTGSVRVK FSIENPPPEM TLGSVVVGEG FSQTRDKIVL PWSALTADQS
GAAVWVVDPK THTVSLKSVA IERYETDAIV VSRGLSIGDR VVVDGGKMLR PGQVVADAGG
AA
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