Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2159 |
Symbol | |
ID | 6409819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2337572 |
End bp | 2338336 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712043 |
Product | pyrroloquinoline quinone biosynthesis protein PqqC |
Protein accession | YP_001991155 |
Protein GI | 192290550 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCGA TGACCGCTTT TTCGCTGAAC GGCGCCGCGC CGCTCGCCAA TGCCGACGAG CTGGAAGCGG CGCTGCGCCA GATCGGCACC GCGCGCTATC ACAATCTGCA TCCGTTCCAT CGCCTGCTGC ACGGCGGCAA GCTCAACAAA GGGCAGGTGC AGGCCTGGGC GCTGAACCGT TACTACTATC AGAGCTCGAT CCCGATCAAA GACGCGGTGG TGATCTCGCG GTTTCGCGAC CGCGCCACCC GCGTCGAGTG GCGGCACCGC ATCGAGGATC ACGACGGCGA TCTGGGTAGC GAAGGCGGCA TCGAGCGCTG GCTGAAGCTG ACCGAAGGGC TGGGTCTGGA CAGCGGTTAC GTCGAGTCGA CCCAGGGCAT TCTGCCGGCG ACGCGGTTTG CGGTGGATGC CTATGTGCAT TTCGTCCGCG ACCGCACGCC GCTGGAGGCG ATCGCCTCGT CGCTGACCGA ATTGTTCGCG CCCAATCTGC ACGAGGAGCG GATCGCCGGG ATGCTGGCGC ATTACGACTT CGTCAATCCC GAGATCATGA GCTACTTCAA GCGCCGCCTG GAGCAGGCAC CGCGCGATAC CGACTTTGCC CTGCGCTACG TCAAGCAGCA CGCCACCACC CCGGCCGAGC GCGAAGCTGT CTGCAACGCG CTGATCTTCA AGACCAACGT GCTGTGGGCC CAGCTCGACG CGCTGCATCA CGCCTATGTC GACGGCCACA TCCCGCCCGG CGCGTTCGTG CCGCAAGGGT TTTGA
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Protein sequence | MNAMTAFSLN GAAPLANADE LEAALRQIGT ARYHNLHPFH RLLHGGKLNK GQVQAWALNR YYYQSSIPIK DAVVISRFRD RATRVEWRHR IEDHDGDLGS EGGIERWLKL TEGLGLDSGY VESTQGILPA TRFAVDAYVH FVRDRTPLEA IASSLTELFA PNLHEERIAG MLAHYDFVNP EIMSYFKRRL EQAPRDTDFA LRYVKQHATT PAEREAVCNA LIFKTNVLWA QLDALHHAYV DGHIPPGAFV PQGF
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