Gene Rpal_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2159 
Symbol 
ID6409819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2337572 
End bp2338336 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID642712043 
Productpyrroloquinoline quinone biosynthesis protein PqqC 
Protein accessionYP_001991155 
Protein GI192290550 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID[TIGR02111] coenzyme PQQ biosynthesis protein C 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCGA TGACCGCTTT TTCGCTGAAC GGCGCCGCGC CGCTCGCCAA TGCCGACGAG 
CTGGAAGCGG CGCTGCGCCA GATCGGCACC GCGCGCTATC ACAATCTGCA TCCGTTCCAT
CGCCTGCTGC ACGGCGGCAA GCTCAACAAA GGGCAGGTGC AGGCCTGGGC GCTGAACCGT
TACTACTATC AGAGCTCGAT CCCGATCAAA GACGCGGTGG TGATCTCGCG GTTTCGCGAC
CGCGCCACCC GCGTCGAGTG GCGGCACCGC ATCGAGGATC ACGACGGCGA TCTGGGTAGC
GAAGGCGGCA TCGAGCGCTG GCTGAAGCTG ACCGAAGGGC TGGGTCTGGA CAGCGGTTAC
GTCGAGTCGA CCCAGGGCAT TCTGCCGGCG ACGCGGTTTG CGGTGGATGC CTATGTGCAT
TTCGTCCGCG ACCGCACGCC GCTGGAGGCG ATCGCCTCGT CGCTGACCGA ATTGTTCGCG
CCCAATCTGC ACGAGGAGCG GATCGCCGGG ATGCTGGCGC ATTACGACTT CGTCAATCCC
GAGATCATGA GCTACTTCAA GCGCCGCCTG GAGCAGGCAC CGCGCGATAC CGACTTTGCC
CTGCGCTACG TCAAGCAGCA CGCCACCACC CCGGCCGAGC GCGAAGCTGT CTGCAACGCG
CTGATCTTCA AGACCAACGT GCTGTGGGCC CAGCTCGACG CGCTGCATCA CGCCTATGTC
GACGGCCACA TCCCGCCCGG CGCGTTCGTG CCGCAAGGGT TTTGA
 
Protein sequence
MNAMTAFSLN GAAPLANADE LEAALRQIGT ARYHNLHPFH RLLHGGKLNK GQVQAWALNR 
YYYQSSIPIK DAVVISRFRD RATRVEWRHR IEDHDGDLGS EGGIERWLKL TEGLGLDSGY
VESTQGILPA TRFAVDAYVH FVRDRTPLEA IASSLTELFA PNLHEERIAG MLAHYDFVNP
EIMSYFKRRL EQAPRDTDFA LRYVKQHATT PAEREAVCNA LIFKTNVLWA QLDALHHAYV
DGHIPPGAFV PQGF