Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2152 |
Symbol | |
ID | 6409812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2330489 |
End bp | 2331274 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712036 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001991148 |
Protein GI | 192290543 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.485399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAT GGGTTCGTTT TCGCGCAGGT GGCGCGGTCG GGTTCGGGAC CATCGCGCAT TCCGATATCA CCGTGCATGA CGGCGACATG TTCGGCGCAA GCAAGCCGAC CGGGCAGACG CTGCAGCTCG GTGATGTCGA GCTGCTCAGC CCGTGCACGC CGGGCAAGAT CATCGGGCTG TGGAACAACT TTCGCGCGCT CGCCGCCAAG CTCAATCAGT CGATCCCGCC GGAGCCATTG TACTTCCTGA AAGCCACCAC CAGCGTCACG TCGCACGGCG CCGTGGTGAG CCGTCCCGCC TCCTACGACG GCAAGGTAGT TTACGAAGGC GAACTCGGCA TCGTCATCGG CAGGCGTTGC AGCAACGTCT CGGAAGCCGA GGCCGCATCG CATATCTTCG GCTACACCTG CGTCAACGAC ATCACCGCCG CCGATATCCT CAATCGCGAT CCGAGCTTCC CGCAATGGGC GCGGGCCAAG AGCTTCGACG GCTTCGGCCC ATTCGGCCCG GCGATCGCCA CCGGGCTCGA TCCGCAGGCG CTGTCGATCC GCACCATTCT GAACGGCGCC GAGCGACAGA ACTACCCGGT TGCCGACATG ATCTTCGCGC CACATCAGCT CGTCAGCCTG CTGTCGCACG ACATGACGCT GGAGCCCGGC GATTTGATCT GCTGCGGCAC CTCGGTCGGC GTCGGCGTGA TGAAGGAGCC GGTCAACGCC GTCACCATCG CGATCGAAGG CATCGGCGAA CTGCACAACG AATTCCGCCA GACGGCGAAA GCCTGA
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Protein sequence | MTKWVRFRAG GAVGFGTIAH SDITVHDGDM FGASKPTGQT LQLGDVELLS PCTPGKIIGL WNNFRALAAK LNQSIPPEPL YFLKATTSVT SHGAVVSRPA SYDGKVVYEG ELGIVIGRRC SNVSEAEAAS HIFGYTCVND ITAADILNRD PSFPQWARAK SFDGFGPFGP AIATGLDPQA LSIRTILNGA ERQNYPVADM IFAPHQLVSL LSHDMTLEPG DLICCGTSVG VGVMKEPVNA VTIAIEGIGE LHNEFRQTAK A
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