Gene Rpal_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2152 
Symbol 
ID6409812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2330489 
End bp2331274 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID642712036 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001991148 
Protein GI192290543 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.485399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAT GGGTTCGTTT TCGCGCAGGT GGCGCGGTCG GGTTCGGGAC CATCGCGCAT 
TCCGATATCA CCGTGCATGA CGGCGACATG TTCGGCGCAA GCAAGCCGAC CGGGCAGACG
CTGCAGCTCG GTGATGTCGA GCTGCTCAGC CCGTGCACGC CGGGCAAGAT CATCGGGCTG
TGGAACAACT TTCGCGCGCT CGCCGCCAAG CTCAATCAGT CGATCCCGCC GGAGCCATTG
TACTTCCTGA AAGCCACCAC CAGCGTCACG TCGCACGGCG CCGTGGTGAG CCGTCCCGCC
TCCTACGACG GCAAGGTAGT TTACGAAGGC GAACTCGGCA TCGTCATCGG CAGGCGTTGC
AGCAACGTCT CGGAAGCCGA GGCCGCATCG CATATCTTCG GCTACACCTG CGTCAACGAC
ATCACCGCCG CCGATATCCT CAATCGCGAT CCGAGCTTCC CGCAATGGGC GCGGGCCAAG
AGCTTCGACG GCTTCGGCCC ATTCGGCCCG GCGATCGCCA CCGGGCTCGA TCCGCAGGCG
CTGTCGATCC GCACCATTCT GAACGGCGCC GAGCGACAGA ACTACCCGGT TGCCGACATG
ATCTTCGCGC CACATCAGCT CGTCAGCCTG CTGTCGCACG ACATGACGCT GGAGCCCGGC
GATTTGATCT GCTGCGGCAC CTCGGTCGGC GTCGGCGTGA TGAAGGAGCC GGTCAACGCC
GTCACCATCG CGATCGAAGG CATCGGCGAA CTGCACAACG AATTCCGCCA GACGGCGAAA
GCCTGA
 
Protein sequence
MTKWVRFRAG GAVGFGTIAH SDITVHDGDM FGASKPTGQT LQLGDVELLS PCTPGKIIGL 
WNNFRALAAK LNQSIPPEPL YFLKATTSVT SHGAVVSRPA SYDGKVVYEG ELGIVIGRRC
SNVSEAEAAS HIFGYTCVND ITAADILNRD PSFPQWARAK SFDGFGPFGP AIATGLDPQA
LSIRTILNGA ERQNYPVADM IFAPHQLVSL LSHDMTLEPG DLICCGTSVG VGVMKEPVNA
VTIAIEGIGE LHNEFRQTAK A