Gene Rpal_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2150 
Symbol 
ID6409810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2328242 
End bp2329210 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID642712034 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_001991146 
Protein GI192290541 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCT ATGTCTACGG CGCCGGTGGC GCCGCCATCA CCGAAGTCGA CAAGCCGGCG 
CCGAAAGGTC CGCAAGTCCT GATCCGGGTC CGCGCCTGCG GGCTCAACCG CGCCGACCTC
GGCATGACCA AGGGCCACGC CCACGGCGCC GCTGGCGGCC TCGGTGCGGT GCTGGGCATG
GAATTCGCCG GCGAAGTCGA AGCGCTTGGC GATGAGGCCT ATGGCTGCAA GATCGGCGAC
CGCGTGATGG GCTCGACTGC CGGAGCGTTC GGCGAGTACA CCCTCGCCGA TCACGGCCGG
CTGCTGCCGA TCCCGGACGG CCTGAGCTTC GAAGAGGCCG CCACCCTGCC CGTCGCCCTC
ACCACGATGC ACAATGCGGT GGTGGCGATC GGCAAGCTGC GCTCGGGGCA GTCGGTGCTG
GTGCAAGGCG CCAGCTCCGG CGTCGGGCTG ATGGCGATGC AGATCGCCAA GCTCAAGGGC
GCCCGCAAGG TGATCGGCTC GTCGACCGAC AAGGGCCGGC GCGACACGCT GCATCAGTTC
GGCGCCGATC TGGCGATCGA CTCCTCCGGC GACGGCTGGG TCGATCAGGT GCTCGCCGCC
ACCGGCGGCG CCGGCGTCGA TCTGGTGATC GACCAGGTCT CCGGCAAGGT CGCCAACCAG
AACCTCGCCG CCACCCGCGT GCTCGGCCGC ATCGTCAATG TCGGCCGGCT CGGCGGCACC
CATGCGGATT TCAATTTCGA CCTGCATGCG GCACGCCGGA TCGACTATGT CGGCGTCACC
TTCCGCAGCC GCAGCGTCGA AGAGGTCCGC GAAATCTTCC GCCAGGTCCG CGGCGACATC
TGGCCGGCGG TCGAAGCCCG CGTTTTGAAG CTGCCGATCG ACAAGGTGTT TCCGTTCACC
GAGATCGGTG CGGCATTCGC CCACATGGAA GCCAACCGCC ACCTCGGCAA GATCGTGGTG
ACGATCTGA
 
Protein sequence
MKAYVYGAGG AAITEVDKPA PKGPQVLIRV RACGLNRADL GMTKGHAHGA AGGLGAVLGM 
EFAGEVEALG DEAYGCKIGD RVMGSTAGAF GEYTLADHGR LLPIPDGLSF EEAATLPVAL
TTMHNAVVAI GKLRSGQSVL VQGASSGVGL MAMQIAKLKG ARKVIGSSTD KGRRDTLHQF
GADLAIDSSG DGWVDQVLAA TGGAGVDLVI DQVSGKVANQ NLAATRVLGR IVNVGRLGGT
HADFNFDLHA ARRIDYVGVT FRSRSVEEVR EIFRQVRGDI WPAVEARVLK LPIDKVFPFT
EIGAAFAHME ANRHLGKIVV TI