Gene Rpal_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2133 
Symbol 
ID6409793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2302849 
End bp2303346 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID642712018 
Productcytochrome C biogenesis protein 
Protein accessionYP_001991130 
Protein GI192290525 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.663387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGC TATTTGCCGC TCTGTTCATC GTGTTCGCGA CCGTCGTCGC GTCGCCGCTG 
GCGCATGCGG TGCAGCCCGA CGAGGTGATG GCCGATCCGA AGCAGGAGTC GCGGGCGCGC
GAGCTATCGC GCGAGCTGCG CTGCATGGTT TGCCAAAACC AGTCGATCGA CGATTCCGAC
GCGACGCTGG CGAAGGACCT GCGGCTGCTG GTGCGCGAGC GGATCGCGGC AGGCGACAGC
AACAAGCAGG TGATCGACTA TCTCGTCTCG CGCTACGGCG AGTTCGTGCT GCTGAAGCCG
CGGTTCGAGA CGCACACGCT GCTGCTGTGG CTGCTGCCGC CGCTGGTGCT GGTCGCCGGC
GGCCTCGGCC TGTGGCTGCA CATCCGCCGA CGCAGCCGCG ACGCCGCCCG TGCCAGCGAC
GCCCTGAAGC CGCTCAGCGC CGACGAGCAG GCGCGGCTCG ACAAACTGCT GGCCGAGGGC
GCGGATCAAG CGCCCTAA
 
Protein sequence
MRKLFAALFI VFATVVASPL AHAVQPDEVM ADPKQESRAR ELSRELRCMV CQNQSIDDSD 
ATLAKDLRLL VRERIAAGDS NKQVIDYLVS RYGEFVLLKP RFETHTLLLW LLPPLVLVAG
GLGLWLHIRR RSRDAARASD ALKPLSADEQ ARLDKLLAEG ADQAP