| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2130 |
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| Symbol | |
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| ID | 6409790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2299133 |
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| End bp | 2300239 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642712015 |
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| Product | cytochrome c-type biogenesis protein CcmI |
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| Protein accession | YP_001991127 |
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| Protein GI | 192290522 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.74489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCTTT GGTTTGTGTT CGCGATGATG ACGGCCGTGG CGGTGTTCGC CGTGCTGTGG
CCGCTCGGGC GTAGCGTCAA GGCGCAGCGC GATGGCAGCG AGGCGGCGGT CTATAAGGAC
CAACTCGCCG AGGTCGACCG CGATGCCGCG ATCGGGCTGA TCGGCCCCTC CGAAGCCTCC
GCCGCCAAGG TCGAGATCGG CCGCCGGCTG CTCGCCAGCG CCGAGGCTGA ACGCACCACC
CCGACCACCA CCCGCCGCGG CCTGCGCCGT CTGGTTGCGC TGACGGCGCT GGTCGGACTG
CCGCTGCTTG CGGTCGCGAT CTATCTGCCG CTCGGCTCGC CGACGCTGCC GGACGAACCG
CTGGTGGCGC GGGCCAAGGC GCCGGCCAGC TCGCAGCCGC TCGACAATCT GGTGGCTCAG
GTCGAGGCGC ATCTGGAGAA GAACCCGACC GACGGCCGCG GCTGGACCGT GCTGGCGCCG
GTGCTGGCCA AGACCGGCCG GTTCGAGGAT GCGGCGCGCG CCTATCGCAA TGCGATTACT
TACGCCGGCG AGACCGCGGA CCGCCGCGCC GATCTCGGCG AGGTGCTGAC CTCGGCGGCG
GGCGGTGTCG TCACCGCCGA TGCCAAGACC GAATTCGAGC GTGCGGTCGC GCTCAATCAG
GATGAAGCCA AGGCGCGCTA CTTCCTCGGC CTCGCGGCCG AACAGGATGG CCGTCCGAAG
GACGCCGCGA CGATCTGGCG CGCGATGCTG GAGAAGGCGC CGGCCGACGC GCCGTGGCGG
CCGATGCTGC AGACCGAGCT CGCCCGCGTC GACGGCACCG CCAAGCAGCC GGCGTTGCCG
GAAGGTGCGG CCGCTGCCGT GCAGAACATG AGCGAAGCCG ATCGTGCCGC GATGATCCAG
GGCATGGTCG CCAAGCTTGC CGCGCGGCTG AAGCAGAACG GCGACGACGT CGACGGCTGG
CTGCGGCTGG TGCGCGCCTA TATGGTGCTC GGCGACACCG ACAGGGCCAA GAGCGCGCAG
ACCGAAGCGC GCCAGGCGGT GGCTGACAAG CCCGACCGGC TGAAGCAGCT CAACGACGGC
CTCAAGGGCC TCGGGCTCGA CGGCTGA
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| Protein sequence | MALWFVFAMM TAVAVFAVLW PLGRSVKAQR DGSEAAVYKD QLAEVDRDAA IGLIGPSEAS
AAKVEIGRRL LASAEAERTT PTTTRRGLRR LVALTALVGL PLLAVAIYLP LGSPTLPDEP
LVARAKAPAS SQPLDNLVAQ VEAHLEKNPT DGRGWTVLAP VLAKTGRFED AARAYRNAIT
YAGETADRRA DLGEVLTSAA GGVVTADAKT EFERAVALNQ DEAKARYFLG LAAEQDGRPK
DAATIWRAML EKAPADAPWR PMLQTELARV DGTAKQPALP EGAAAAVQNM SEADRAAMIQ
GMVAKLAARL KQNGDDVDGW LRLVRAYMVL GDTDRAKSAQ TEARQAVADK PDRLKQLNDG
LKGLGLDG
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