Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2127 |
Symbol | |
ID | 6409787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2295392 |
End bp | 2296783 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642712012 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001991124 |
Protein GI | 192290519 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCCA AACCATCCCG CCGCGGCAGT TCGCTCGCCA CCCGGCTGTT CCTGTCGGCG ACCGCCTGGG TGGTGGTGAT CCTGGCGATC ACCGGCATCG CGCTGTCGTC GGTGTATCGC GGCGCCTCGG AGCGGGCGTT CGACCGCCGG CTCAACCTCT ATCTCCGCAC CATCATCGCC GAGGTTGCGA CCCCCGACAC CAACCAGGAG GCGTTCCAAT CGATCGGCGA GCCGCTGTTC GATCTGCCGT TGTCCGGCTG GTACTGGCAG GTGGTCCGCA CCGACGGCGA GAAGCCGGAG ACGCGCGCCT CCCGGTCGCT GTGGGACCGC AAGCTGCCGC GGCTGGAGGA TCAGGGCATC GAGCTCGGCC CCTCCGGCGT TCGGCACGGC TATGTCGACG GACCGGAGGG CCAGACCCTG CGCATGGTCG AGCGGCCGGT CGATCTCGGC CTCGACGGCA AATTCATCGT CACCGTCGCC GGCGACGCCA CCGAGATTTT CGAAGAAACC CGCACCTTCG ATTATTATCT CGCGGGCACC TTCCTGGCGC TGTCGATCGG CCTGGTGCTG ACCACGATCT TCCAGGTCCG GTTCGGCCTC GCGCCGCTGA AGCGGATCTC GGAGTCGATC GCCGACGTCC GGTCCGGCCG TGCGGAGCGG CTGGAGGGCC AGTTCCCGGT CGAAATCGCC ACCCTGGCGC GTGAGACCAA CGCGCTGATC GAAGCCAACC GCGAAATCGT CGAGCGCGCC CGGACCCACG TCGGCAATCT GGCGCATGCG ATCAAGACGC CGCTGTCGGT GCTGGTTAAT GAGGCCAGCG CCCGCCCAGG CGATCCGCTG GCCGCGAAGG TGATGGAGCA GGCCGAGCTG ATGCGCAGTC AGGTTACCCA TCATCTGGAG CGCGCCCGGA TCGCGGCGCG GCTCACCGTC ATCGGCACCA TCACCGAGGT CGAGCCGGTG ATCGAGGCGC TGCGCCGGAC CATGGAGAAG ATCCACCGCG ACCGCGCCAT CCAGGTCCGC GCCGAGGTCG CCGCCGGCCT CAAGTTCCGC GGCGAGCGCC AGGACCTCGA GGAGATGGTG GGCAATCTCG TCGACAACGC CTGCAAATGG GCGGCGGGAC GGGTGTTCAT CGCGGTCACC GGCGAGAAGA GCGACGAGCC CGGCGGTCCG CCCAAACTGC GGATCGTGGT CGACGACGAC GGTATCGGGC TATCGGCCGA GCAGCGCGCG CTGGTCGCCC GCCGCGGCAA ACGGCTCGAC GAGAGCAAGC CCGGCTCCGG TCTTGGATTG GCAATTGTCG TTGATCTTGC AGCGCTTTAC GGCGGCGAGC TGAAGCTCGA CAACGCCCCG ATCGGCGGTC TGCGCGCCGA GCTGTGGCTG CCTGCGGCAT AA
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Protein sequence | MTAKPSRRGS SLATRLFLSA TAWVVVILAI TGIALSSVYR GASERAFDRR LNLYLRTIIA EVATPDTNQE AFQSIGEPLF DLPLSGWYWQ VVRTDGEKPE TRASRSLWDR KLPRLEDQGI ELGPSGVRHG YVDGPEGQTL RMVERPVDLG LDGKFIVTVA GDATEIFEET RTFDYYLAGT FLALSIGLVL TTIFQVRFGL APLKRISESI ADVRSGRAER LEGQFPVEIA TLARETNALI EANREIVERA RTHVGNLAHA IKTPLSVLVN EASARPGDPL AAKVMEQAEL MRSQVTHHLE RARIAARLTV IGTITEVEPV IEALRRTMEK IHRDRAIQVR AEVAAGLKFR GERQDLEEMV GNLVDNACKW AAGRVFIAVT GEKSDEPGGP PKLRIVVDDD GIGLSAEQRA LVARRGKRLD ESKPGSGLGL AIVVDLAALY GGELKLDNAP IGGLRAELWL PAA
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