Gene Rpal_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2127 
Symbol 
ID6409787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2295392 
End bp2296783 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content68% 
IMG OID642712012 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001991124 
Protein GI192290519 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCA AACCATCCCG CCGCGGCAGT TCGCTCGCCA CCCGGCTGTT CCTGTCGGCG 
ACCGCCTGGG TGGTGGTGAT CCTGGCGATC ACCGGCATCG CGCTGTCGTC GGTGTATCGC
GGCGCCTCGG AGCGGGCGTT CGACCGCCGG CTCAACCTCT ATCTCCGCAC CATCATCGCC
GAGGTTGCGA CCCCCGACAC CAACCAGGAG GCGTTCCAAT CGATCGGCGA GCCGCTGTTC
GATCTGCCGT TGTCCGGCTG GTACTGGCAG GTGGTCCGCA CCGACGGCGA GAAGCCGGAG
ACGCGCGCCT CCCGGTCGCT GTGGGACCGC AAGCTGCCGC GGCTGGAGGA TCAGGGCATC
GAGCTCGGCC CCTCCGGCGT TCGGCACGGC TATGTCGACG GACCGGAGGG CCAGACCCTG
CGCATGGTCG AGCGGCCGGT CGATCTCGGC CTCGACGGCA AATTCATCGT CACCGTCGCC
GGCGACGCCA CCGAGATTTT CGAAGAAACC CGCACCTTCG ATTATTATCT CGCGGGCACC
TTCCTGGCGC TGTCGATCGG CCTGGTGCTG ACCACGATCT TCCAGGTCCG GTTCGGCCTC
GCGCCGCTGA AGCGGATCTC GGAGTCGATC GCCGACGTCC GGTCCGGCCG TGCGGAGCGG
CTGGAGGGCC AGTTCCCGGT CGAAATCGCC ACCCTGGCGC GTGAGACCAA CGCGCTGATC
GAAGCCAACC GCGAAATCGT CGAGCGCGCC CGGACCCACG TCGGCAATCT GGCGCATGCG
ATCAAGACGC CGCTGTCGGT GCTGGTTAAT GAGGCCAGCG CCCGCCCAGG CGATCCGCTG
GCCGCGAAGG TGATGGAGCA GGCCGAGCTG ATGCGCAGTC AGGTTACCCA TCATCTGGAG
CGCGCCCGGA TCGCGGCGCG GCTCACCGTC ATCGGCACCA TCACCGAGGT CGAGCCGGTG
ATCGAGGCGC TGCGCCGGAC CATGGAGAAG ATCCACCGCG ACCGCGCCAT CCAGGTCCGC
GCCGAGGTCG CCGCCGGCCT CAAGTTCCGC GGCGAGCGCC AGGACCTCGA GGAGATGGTG
GGCAATCTCG TCGACAACGC CTGCAAATGG GCGGCGGGAC GGGTGTTCAT CGCGGTCACC
GGCGAGAAGA GCGACGAGCC CGGCGGTCCG CCCAAACTGC GGATCGTGGT CGACGACGAC
GGTATCGGGC TATCGGCCGA GCAGCGCGCG CTGGTCGCCC GCCGCGGCAA ACGGCTCGAC
GAGAGCAAGC CCGGCTCCGG TCTTGGATTG GCAATTGTCG TTGATCTTGC AGCGCTTTAC
GGCGGCGAGC TGAAGCTCGA CAACGCCCCG ATCGGCGGTC TGCGCGCCGA GCTGTGGCTG
CCTGCGGCAT AA
 
Protein sequence
MTAKPSRRGS SLATRLFLSA TAWVVVILAI TGIALSSVYR GASERAFDRR LNLYLRTIIA 
EVATPDTNQE AFQSIGEPLF DLPLSGWYWQ VVRTDGEKPE TRASRSLWDR KLPRLEDQGI
ELGPSGVRHG YVDGPEGQTL RMVERPVDLG LDGKFIVTVA GDATEIFEET RTFDYYLAGT
FLALSIGLVL TTIFQVRFGL APLKRISESI ADVRSGRAER LEGQFPVEIA TLARETNALI
EANREIVERA RTHVGNLAHA IKTPLSVLVN EASARPGDPL AAKVMEQAEL MRSQVTHHLE
RARIAARLTV IGTITEVEPV IEALRRTMEK IHRDRAIQVR AEVAAGLKFR GERQDLEEMV
GNLVDNACKW AAGRVFIAVT GEKSDEPGGP PKLRIVVDDD GIGLSAEQRA LVARRGKRLD
ESKPGSGLGL AIVVDLAALY GGELKLDNAP IGGLRAELWL PAA