Gene Rpal_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2113 
Symbol 
ID6409773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2280950 
End bp2281588 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID642711998 
Producthypothetical protein 
Protein accessionYP_001991110 
Protein GI192290505 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0256952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCT TCCACGAAGT CCTGTTTCTG CTCGATGTCG CGCTGAAGAG CGCGGGCGGG 
CCGGAGCGGC GTACCGAGAT CGTCGGCTTC GGCTCGGGCC GCGAACAGCG CAACGCGCGC 
TGGGCGGACT CGCGGCGGCG CTACGACGCC GGTTACGGCG TCAAGACGTT CGAGGCGCTG 
CAGCAGGTGG TGGCGTTCTT CGAAGAGCGC CGCGGGCCGC TCACCGGCTT CCGCTGGCGC 
GACCGGCTGG ACTGCAGTTC GGCCGCGCCC GGCGCGCCGG TGTCGCCGCT CGATCAGGGC 
ATCGGCATCG GTGACGGCAC ACGCGCGAGC TATCAGCTCG TCAAGACCTA CGGTGCGGGC 
TTCGCGCCCT ATGTACGCAC CATCACCAAG CCGGTGGCCG GCAGCGTGCG CGTCGCAGTC 
GGCGGCGTCG AGGCAGCCGC CGCGACGTTC GCCTGCGATC CCGCCACCGG CGTCGTCACC 
TTCGCGCCCG GCCACCTGCC GCCGTCCGGC GCCGCGGTGA CCTCCGGCTT TCAGTTCGAC 
GTCCCGGTGC GGTTCGACAC CGACTATCTC GAAGTCGATC TCTCGGCGTT TGCCGCCGGC 
GCGATCCCGA AGATCCCGCT GGTCGAAATC AGGGTGTGA
 
Protein sequence
MTPFHEVLFL LDVALKSAGG PERRTEIVGF GSGREQRNAR WADSRRRYDA GYGVKTFEAL 
QQVVAFFEER RGPLTGFRWR DRLDCSSAAP GAPVSPLDQG IGIGDGTRAS YQLVKTYGAG 
FAPYVRTITK PVAGSVRVAV GGVEAAAATF ACDPATGVVT FAPGHLPPSG AAVTSGFQFD 
VPVRFDTDYL EVDLSAFAAG AIPKIPLVEI RV