| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2091 |
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| Symbol | |
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| ID | 6409751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2264750 |
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| End bp | 2266429 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711976 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001991088 |
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| Protein GI | 192290483 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.382764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGTC GTAAGTCCAA GAGCGATGCC GCAGCCTTGA CGCTGCTGGC GACGAAAGCA
GTCCGCGCGA ACATCATGGT GTCGGACCCA GAACTTGATA TTGTTTACAT GAACGACTCG
GTGACTTCGC TGCTACGCGA CGCCGAGAGC GATCTGCGCA AGGAACTGCC GAAGTTCAAC
GTCGACACGC TGATCGGCAC AAATATCGAC AACTTCCACA AAAATCCCGG CCATCAGCGC
CAGATGCTCA AGAGCCTCGC CTCAGTGCAT CGGGCAACGA TCCAGATTGG GCCGCGGATT
TTCGATTTGA TCGCGACGCC GATCAACAAT GCCGATGGCA GCCGAGCGGG GGTCGTGGTC
GAGTGGGCCG ATGCATCGAT CCGGCTGCAG AATCTCGATT TCGCAGGGCA GGTGGCGGCG
GCCAACCGCT CGCAGGCGGT GATCGAGTTC AACATGGACG GCACGATCCG GACCGCGAAC
GAGAATTTCC TGAAGACGAT CGGCTACACC CTCGACGAGA TCAAGGGCGA GCACCACAGT
ATGTTCGTCG AGCCGGCCGA TCGCGACAGC GCGGCGTATC GCGAGTTCTG GGCCGCGCTC
AATCGCGGTG AATACCAGGC GGCCGAATAT AAGCGGATCG GCAAGGGAGG CCGCGAGATC
TGGCTGCAGG CATCCTACAA TCCGATCTTC GATGATAAGG GGCGGCCTGC CAAGGTGGTG
AAATTCGCCA CCGACGTCAC CGAACAGAAA CTGCGCAACG CCGATATGGC CGGCCAGATC
GCCGCGATCG GCAAGTCGCA GGCAGTAATC GAATTCGACA TGGACGGCAC GGTGCTCACC
GCCAATGACA ACTTCCTGCG AGCGTTGGGC TACTCACTCG CCGAGATCAA GGGCCAGCCC
CACAGTATGT TCGTCGACCC GTCGGAGCGC GCCGGCGCGG CGTATCGCGA GTTCTGGGCC
TCGCTCAATC GCGGCGAATA CCAGGCGGCG GAATACAAAC GGATCGGTAA GGGCGGCCGC
GAAGTTTACA TCCAGGCATC CTACAATCCG ATCCTCGACC TCAACGGCCG ACCGTTCAAG
GTGGTGAAAT TCGCCACCGA CGTCACCAAG CAGGTGCTGG CCCGCATCGG TAACGACCGG
GTGCGCGGCA TGATGGAGAC GGTGGCCGCT GGCGCGGAGG AGCTCAACAC TTCGGTACGT
GAGATTTCCT CGACAATGGC CAAGTCGCGT GAGACCGCGG CCGGCGCCGT CGACCGCGTG
TCGAATGCCG ATGCGCAGGC GCAGCGCCTC ACCAGCGCCG CGCAATCGAT GAGCGGCATC
GTGGAGCTGA TCAATAACAT CACCGGCCAG ATCAATTTGC TGGCGCTCAA CGCGACGATC
GAGTCGGCGC GCGCCGGCGA GGCTGGTCGC GGTTTTGCTG TGGTTGCCGC CGAGGTCAAG
AACCTCGCCA ATCAGGCCAA GCAGGCGACC GACAAGATCG GCGAGGAAAT CAGCAGCCTC
AATTCGATCT CCGGCGATGT CGCGATGGCG CTGAATGCCA TCAAGCAGGC GATCAACGAG
GTCAGCGAGT ATGTGACTTC GACCGCCGCA GCGGTCGAAG AGCAGAGCAC CGTGACCAGC
GAGATGTCGA GCAGTATGCA ACGCGCGGCC GTCGAGGCGG CGCGGATCGC CGCCGGCTGA
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| Protein sequence | MFGRKSKSDA AALTLLATKA VRANIMVSDP ELDIVYMNDS VTSLLRDAES DLRKELPKFN
VDTLIGTNID NFHKNPGHQR QMLKSLASVH RATIQIGPRI FDLIATPINN ADGSRAGVVV
EWADASIRLQ NLDFAGQVAA ANRSQAVIEF NMDGTIRTAN ENFLKTIGYT LDEIKGEHHS
MFVEPADRDS AAYREFWAAL NRGEYQAAEY KRIGKGGREI WLQASYNPIF DDKGRPAKVV
KFATDVTEQK LRNADMAGQI AAIGKSQAVI EFDMDGTVLT ANDNFLRALG YSLAEIKGQP
HSMFVDPSER AGAAYREFWA SLNRGEYQAA EYKRIGKGGR EVYIQASYNP ILDLNGRPFK
VVKFATDVTK QVLARIGNDR VRGMMETVAA GAEELNTSVR EISSTMAKSR ETAAGAVDRV
SNADAQAQRL TSAAQSMSGI VELINNITGQ INLLALNATI ESARAGEAGR GFAVVAAEVK
NLANQAKQAT DKIGEEISSL NSISGDVAMA LNAIKQAINE VSEYVTSTAA AVEEQSTVTS
EMSSSMQRAA VEAARIAAG
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