| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2075 |
|---|
| Symbol | |
|---|
| ID | 6409735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2246091 |
|---|
| End bp | 2246834 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642711961 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_001991073 |
|---|
| Protein GI | 192290468 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC TGATCATCAT CGCCGTCGCC GGCCTGTGGG CCGGCGTTCA GAACACGCTC
GCGGGTGGCG GGTCGTTCGT GACGTTGCCG GCGCTGCTGT TCGCCGGGAT GACGCCGCTG
TCGGCGAACA TCACCTCCAC GGTCGCGCTG TTTCCCGGCC AGCTCGCTTC GGGCTACGCC
GGCCGCGGCA TGGTGCGCGG CGTGGGCGAG GTCAGTTTCC GGGCGCTGGT GTTCACCAGC
CTTGCGGGCG GTGCGGCCGG TGCGCTGCTG CTCTTGATCA CGCCGCCGAC CGTGTTCGCC
AAGATGATCC CGTGGCTGGT GCTGTTCGCC ACCGCGATGT TCGCGTGGGG CAGCTTCGGC
CGTAAACCGA GTGCGCAGGC GCGGCACGTC GGCGCACCGG TGCTGATCGG GATTCAGTTT
CTGATCTCGA TCTATGGCGG TTACTTCGGC GGCGGCATCG GCTTTCTGAT GATGGCTGCG
CTGTCGATCG CCGGCATGAC GGCGCGCAAC GCCGGCGCCA CCAAGAATGC GCTGGCGGCG
GCGATGAACG CCTCGGCGGT GGCGATGTTC GCGTTCTCGC CCGAGGTGAA GTGGCTGGAG
GCGCTGGTGC TCGCGGTGTC GTCGACGGTC GGTTACTTGC TCGGCGTCTG GGTGCTGCGC
CGGGTCAACG AAACCATGCT CAGAATCGGC GTCGTCGTGC TCGGCCTCGT GCTGACGATT
GGGCTGTTCT GGCGGCAGAT GTAG
|
|---|
| Protein sequence | MTALIIIAVA GLWAGVQNTL AGGGSFVTLP ALLFAGMTPL SANITSTVAL FPGQLASGYA
GRGMVRGVGE VSFRALVFTS LAGGAAGALL LLITPPTVFA KMIPWLVLFA TAMFAWGSFG
RKPSAQARHV GAPVLIGIQF LISIYGGYFG GGIGFLMMAA LSIAGMTARN AGATKNALAA
AMNASAVAMF AFSPEVKWLE ALVLAVSSTV GYLLGVWVLR RVNETMLRIG VVVLGLVLTI
GLFWRQM
|
|---|
| |