Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2073 |
Symbol | |
ID | 6409733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2242979 |
End bp | 2245255 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711959 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_001991071 |
Protein GI | 192290466 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGAAGA TTCTGCCAGA CAATTGGAAG CAGCGGATCC GGAATTGGTT TCTGGACCTG GACGCCCGGC TCGACTCGAC GCTGTTCTCA TCGGCGGTTG GTATCCGAGA GCTGTGGGAG CGGTTCTCGA CCTATATGGA CCGCTTCTAT GTCGGCGGCT GGAAGCGCTG GGTGTTCATC GAGCCGCTGT CGGAAGCCGC TTCGATCGGA CTGCTCGGCC TCGTCGCGCT GCTGGCGTTG GCGCAACCGG CATTCCGCGA GACCTCCGAC GAGGACTGGC TGAAGAAGTC CGACCTCGCC GTCACCTTCC TCGACCGCTA CGGTAATCCG ATTGGCAGCC GCGGCATCAA ACACAACGAC GCGATCCCGC TCGAGGACTT CCCGGACAAC CTGATCAAGG CGACGCTCGC GACCGAGGAC CGTCGGTTCT ACGACCATTT CGGCATCGAC GTCGCGGGCA CGTTGCGCGC GCTGGTCACC AATGCCCAGG CCGGCGGCGT GCGCCAGGGC GGCTCCTCGA TCAGCCAGCA GCTCGCCAAG AACCTGTTCC TGTCCAACGA GCGCACGCTC GAACGCAAGA TCAACGAAGC GTTCCTGGCG ATCTGGCTGG AAACCCGGCT GACCAAGAAC GAGATCCTGA AGCTGTATCT CGACCGCGCC TATATGGGCG GCGGCACCTT CGGCGCCGAC GGCGCGGCCC ACTTCTACTT CAATAAGTCG GTGCGCGACG TGAACCTCGC CGAGGCGGCG ATGCTCGCCG GCCTGTTCAA GGCGCCGACC AAATACGCCC CGCACATCAA CCTGCCGGCC GCCCGCGCCC GCGCCAACCA GGTGCTCGAC AATCTGGTCG ACGCCGGGTT CATGACCGAA GGCCAGGTAT TCGGCGCCCG CCGCAACCCG GCCTCGGTGG TCGACCGCCG CGACGAGAAC TCGCCGAACT ACTATCTCGA TTGGGCGTTC GACGAAGTCC GCAAGATCGT CGACACCTTC CCGAAGTCGT ACACCGAGCG CGTGTTCGTG GTCCGCACCG CGATTGACAT GAACGTACAG CGCGCCGCCG AGAGCGCGAT CGAGAACCAG CTCCGGCAGT TCGGCCGCGA CTATCACGCG ACCCAGGCCG CCACCGTGGT GTCCGATCTC GATGGCGGCG TCCGCGCCAT GGTCGGCGGT CGCGACTACG GCTCCAGCCA GTTCAACCGC GCGGTCGACG CCTATCGCCA GCCGGGTTCG TCGTTCAAGC CTTACGTCTA CACCACGGCG CTGCTGAACG GCTTCAAGCC GACCTCGATC GTGGTCGATG GCCCGGTCTG CCTCGGCAAC TGGTGCCCGC AAAACTACGG TCACTCTTAT TCCGGCTCGG TGACGCTGAC CCAGGCGATC ACCCGCTCGA TCAACGTGGT GCCGGTCAAG CTGTCGATCG CGATCGGCGG CAATCCGAAG AACCAGTGGG ACTCGGCCAA GAAGGGCCGC GCCAAGATCG TCGAGGTCGC GCGCCGGTTC GGCCTCACCG CGCCGCTGCT CGATACTCCG TCGCTACCGA TCGGTTCGAC CGAAGTCACC GTCGTCGAAC ACGCGGTCGC CTATGTGACC TTCCCCAACA AAGGCATGGC GGTGAAGCCG CATGCGGTGC TGGAGATCCG CACCGGCGCC GGCGACTTGG TGTGGCGCTG GGACCGCGAC GGCCCGCAGC CGCGGCGCGC GATCCCGGCC AACATCGCCT CGGATATGGC CGGGATGATG AGCCACGTCG TCACCGAGGG CACCGCGCGG CGCGCGCGGC TCGACGGCAT TCCGGCGGCT GGCAAGACCG GTACCACCAA CGCGTATCGC GACGCCTGGT TCGTCGGCTA CACCGGCAAC TTCGCTTGCG CGGTGTGGTA CGGCAACGAC GACTACTCGC CGACTAACCG GATGACCGGC GGCTCGCTGC CTGCGCAAAC CTGGCACGAC ATCATGGTGG CGGCGCATCA GGGCGTCGAG GTCAAGGAGC TCGCCGGCGT CGGCATGGGC GAGAAGCTGC CGGCGACGCC GGGCGAACGC GCGGCGGGCG CCGAGAGCGC CGAAATGAAA GCGGCCCCGC CGCCGGTGCT GACGCGGCGC GGCGCCGAGA TCCTGGTACG GGTGGAGAAG ATGCTCGACG AGACCAGCCG TGCACTCGAT TCCGCCCCTG CACCGGCGAC TGGCCGCAAG GTGTCGACCG GGACAGTCGG CTTGACCGAC AGCATGGCCG CGGCGGCGCC CGGCTCCGCC CCGGCTGCGG CGGCCCAGAA GAATTGA
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Protein sequence | MPKILPDNWK QRIRNWFLDL DARLDSTLFS SAVGIRELWE RFSTYMDRFY VGGWKRWVFI EPLSEAASIG LLGLVALLAL AQPAFRETSD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND AIPLEDFPDN LIKATLATED RRFYDHFGID VAGTLRALVT NAQAGGVRQG GSSISQQLAK NLFLSNERTL ERKINEAFLA IWLETRLTKN EILKLYLDRA YMGGGTFGAD GAAHFYFNKS VRDVNLAEAA MLAGLFKAPT KYAPHINLPA ARARANQVLD NLVDAGFMTE GQVFGARRNP ASVVDRRDEN SPNYYLDWAF DEVRKIVDTF PKSYTERVFV VRTAIDMNVQ RAAESAIENQ LRQFGRDYHA TQAATVVSDL DGGVRAMVGG RDYGSSQFNR AVDAYRQPGS SFKPYVYTTA LLNGFKPTSI VVDGPVCLGN WCPQNYGHSY SGSVTLTQAI TRSINVVPVK LSIAIGGNPK NQWDSAKKGR AKIVEVARRF GLTAPLLDTP SLPIGSTEVT VVEHAVAYVT FPNKGMAVKP HAVLEIRTGA GDLVWRWDRD GPQPRRAIPA NIASDMAGMM SHVVTEGTAR RARLDGIPAA GKTGTTNAYR DAWFVGYTGN FACAVWYGND DYSPTNRMTG GSLPAQTWHD IMVAAHQGVE VKELAGVGMG EKLPATPGER AAGAESAEMK AAPPPVLTRR GAEILVRVEK MLDETSRALD SAPAPATGRK VSTGTVGLTD SMAAAAPGSA PAAAAQKN
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