Gene Rpal_2073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2073 
Symbol 
ID6409733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2242979 
End bp2245255 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content67% 
IMG OID642711959 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_001991071 
Protein GI192290466 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAGA TTCTGCCAGA CAATTGGAAG CAGCGGATCC GGAATTGGTT TCTGGACCTG 
GACGCCCGGC TCGACTCGAC GCTGTTCTCA TCGGCGGTTG GTATCCGAGA GCTGTGGGAG
CGGTTCTCGA CCTATATGGA CCGCTTCTAT GTCGGCGGCT GGAAGCGCTG GGTGTTCATC
GAGCCGCTGT CGGAAGCCGC TTCGATCGGA CTGCTCGGCC TCGTCGCGCT GCTGGCGTTG
GCGCAACCGG CATTCCGCGA GACCTCCGAC GAGGACTGGC TGAAGAAGTC CGACCTCGCC
GTCACCTTCC TCGACCGCTA CGGTAATCCG ATTGGCAGCC GCGGCATCAA ACACAACGAC
GCGATCCCGC TCGAGGACTT CCCGGACAAC CTGATCAAGG CGACGCTCGC GACCGAGGAC
CGTCGGTTCT ACGACCATTT CGGCATCGAC GTCGCGGGCA CGTTGCGCGC GCTGGTCACC
AATGCCCAGG CCGGCGGCGT GCGCCAGGGC GGCTCCTCGA TCAGCCAGCA GCTCGCCAAG
AACCTGTTCC TGTCCAACGA GCGCACGCTC GAACGCAAGA TCAACGAAGC GTTCCTGGCG
ATCTGGCTGG AAACCCGGCT GACCAAGAAC GAGATCCTGA AGCTGTATCT CGACCGCGCC
TATATGGGCG GCGGCACCTT CGGCGCCGAC GGCGCGGCCC ACTTCTACTT CAATAAGTCG
GTGCGCGACG TGAACCTCGC CGAGGCGGCG ATGCTCGCCG GCCTGTTCAA GGCGCCGACC
AAATACGCCC CGCACATCAA CCTGCCGGCC GCCCGCGCCC GCGCCAACCA GGTGCTCGAC
AATCTGGTCG ACGCCGGGTT CATGACCGAA GGCCAGGTAT TCGGCGCCCG CCGCAACCCG
GCCTCGGTGG TCGACCGCCG CGACGAGAAC TCGCCGAACT ACTATCTCGA TTGGGCGTTC
GACGAAGTCC GCAAGATCGT CGACACCTTC CCGAAGTCGT ACACCGAGCG CGTGTTCGTG
GTCCGCACCG CGATTGACAT GAACGTACAG CGCGCCGCCG AGAGCGCGAT CGAGAACCAG
CTCCGGCAGT TCGGCCGCGA CTATCACGCG ACCCAGGCCG CCACCGTGGT GTCCGATCTC
GATGGCGGCG TCCGCGCCAT GGTCGGCGGT CGCGACTACG GCTCCAGCCA GTTCAACCGC
GCGGTCGACG CCTATCGCCA GCCGGGTTCG TCGTTCAAGC CTTACGTCTA CACCACGGCG
CTGCTGAACG GCTTCAAGCC GACCTCGATC GTGGTCGATG GCCCGGTCTG CCTCGGCAAC
TGGTGCCCGC AAAACTACGG TCACTCTTAT TCCGGCTCGG TGACGCTGAC CCAGGCGATC
ACCCGCTCGA TCAACGTGGT GCCGGTCAAG CTGTCGATCG CGATCGGCGG CAATCCGAAG
AACCAGTGGG ACTCGGCCAA GAAGGGCCGC GCCAAGATCG TCGAGGTCGC GCGCCGGTTC
GGCCTCACCG CGCCGCTGCT CGATACTCCG TCGCTACCGA TCGGTTCGAC CGAAGTCACC
GTCGTCGAAC ACGCGGTCGC CTATGTGACC TTCCCCAACA AAGGCATGGC GGTGAAGCCG
CATGCGGTGC TGGAGATCCG CACCGGCGCC GGCGACTTGG TGTGGCGCTG GGACCGCGAC
GGCCCGCAGC CGCGGCGCGC GATCCCGGCC AACATCGCCT CGGATATGGC CGGGATGATG
AGCCACGTCG TCACCGAGGG CACCGCGCGG CGCGCGCGGC TCGACGGCAT TCCGGCGGCT
GGCAAGACCG GTACCACCAA CGCGTATCGC GACGCCTGGT TCGTCGGCTA CACCGGCAAC
TTCGCTTGCG CGGTGTGGTA CGGCAACGAC GACTACTCGC CGACTAACCG GATGACCGGC
GGCTCGCTGC CTGCGCAAAC CTGGCACGAC ATCATGGTGG CGGCGCATCA GGGCGTCGAG
GTCAAGGAGC TCGCCGGCGT CGGCATGGGC GAGAAGCTGC CGGCGACGCC GGGCGAACGC
GCGGCGGGCG CCGAGAGCGC CGAAATGAAA GCGGCCCCGC CGCCGGTGCT GACGCGGCGC
GGCGCCGAGA TCCTGGTACG GGTGGAGAAG ATGCTCGACG AGACCAGCCG TGCACTCGAT
TCCGCCCCTG CACCGGCGAC TGGCCGCAAG GTGTCGACCG GGACAGTCGG CTTGACCGAC
AGCATGGCCG CGGCGGCGCC CGGCTCCGCC CCGGCTGCGG CGGCCCAGAA GAATTGA
 
Protein sequence
MPKILPDNWK QRIRNWFLDL DARLDSTLFS SAVGIRELWE RFSTYMDRFY VGGWKRWVFI 
EPLSEAASIG LLGLVALLAL AQPAFRETSD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND
AIPLEDFPDN LIKATLATED RRFYDHFGID VAGTLRALVT NAQAGGVRQG GSSISQQLAK
NLFLSNERTL ERKINEAFLA IWLETRLTKN EILKLYLDRA YMGGGTFGAD GAAHFYFNKS
VRDVNLAEAA MLAGLFKAPT KYAPHINLPA ARARANQVLD NLVDAGFMTE GQVFGARRNP
ASVVDRRDEN SPNYYLDWAF DEVRKIVDTF PKSYTERVFV VRTAIDMNVQ RAAESAIENQ
LRQFGRDYHA TQAATVVSDL DGGVRAMVGG RDYGSSQFNR AVDAYRQPGS SFKPYVYTTA
LLNGFKPTSI VVDGPVCLGN WCPQNYGHSY SGSVTLTQAI TRSINVVPVK LSIAIGGNPK
NQWDSAKKGR AKIVEVARRF GLTAPLLDTP SLPIGSTEVT VVEHAVAYVT FPNKGMAVKP
HAVLEIRTGA GDLVWRWDRD GPQPRRAIPA NIASDMAGMM SHVVTEGTAR RARLDGIPAA
GKTGTTNAYR DAWFVGYTGN FACAVWYGND DYSPTNRMTG GSLPAQTWHD IMVAAHQGVE
VKELAGVGMG EKLPATPGER AAGAESAEMK AAPPPVLTRR GAEILVRVEK MLDETSRALD
SAPAPATGRK VSTGTVGLTD SMAAAAPGSA PAAAAQKN