Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2071 |
Symbol | |
ID | 6409731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2241794 |
End bp | 2242360 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711957 |
Product | conserved hypothetical protein; putative signal peptide |
Protein accession | YP_001991069 |
Protein GI | 192290464 |
COG category | [S] Function unknown |
COG ID | [COG5436] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGCT TCGCCATCGC CATCATTGCC GGACTGGTCC TCGGCGGCAT CGTGCATCTC GTCACCGTCC TGGTGCTGCC GCGGATCGCC GGCCAGGACG CCTACGCCCG GCTAGCGCCG CTGACCCAGG TCAACGCGGT GACGCAGCTG CCGGAGATTA CGCCCGACAA CGCACCGCTG CCGCTGCTCG ATCCGGCGTT CGCGATGGCG GTGTGCCGCT ACGATCTGTC GAAGGGCCCG ATCAAGCTGG CGGTGCCTGT GAGCCAAGCC TACACCGCGG TGTCATTCTA CACCCGCAAT GAAGTCGCCT ACTACGCGAT CAACGATCGC TCCGCCGGCC GCAAGGTGAT CGAGCTCGAT CTGATGACCG CCGAGCAGCA CGCCGAGCTG CCCGAAGACG AAGACGTGAC CTCGGCTGAC CGCCTGATCA TCGACTCGCC CACTGCCACC GGCCTGATCT TGATGAAGGC GCTCGCTTCG GAGCCCGGCC TAATGCCGCA GGCCCGCGCC GCGCTGAAGG CCGCCACTTG CAAGTCGCAG AGTGACGCCG CAGCGAAATC GAGCTGA
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Protein sequence | MIRFAIAIIA GLVLGGIVHL VTVLVLPRIA GQDAYARLAP LTQVNAVTQL PEITPDNAPL PLLDPAFAMA VCRYDLSKGP IKLAVPVSQA YTAVSFYTRN EVAYYAINDR SAGRKVIELD LMTAEQHAEL PEDEDVTSAD RLIIDSPTAT GLILMKALAS EPGLMPQARA ALKAATCKSQ SDAAAKSS
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