| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2067 |
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| Symbol | |
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| ID | 6409727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2238927 |
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| End bp | 2239997 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711953 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001991065 |
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| Protein GI | 192290460 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAT TTGCGGTGCT GGCAGCCGGC TGTAGCACGC TGGCTGTTCT GGTCGGGCTC
GGCGCCGGCC GCGCGTGGTT CACGCTCACC CCCTCCAAGA TCGACGCCGC CCGCGCTCCG
TCCGCTTCGG AAGAAATCAC CACCGGCACG ATCGCTGCGC GCTGGCCGAC GCCCGGCGGT
GCGCCTCCGC GCGCCGCGCA GAGCCCCGCT CCGAACATCC AGCCGGCCCG CGCCACAGCC
GACCCCGCGC TCAACGCCAA GCCTGCTGCG CTGCCGGCCC CGGCGCCGGT GCGGCAGACC
TGCAGCAATC CGAACGCGCT CGGCATTTCG CGTACCGTCG AGATCGACAC ATCGGGCGGC
CCTGGCCTCG GCATGTCGCA ATATCGCGAC TACGACTTCC TGCAGCCCGG CGAAGTCGCA
CTGACCTTCG ACGACGGCCC TTGGCCGGTG AATACTCCGG CGGTTCTGGC GGCGCTGGAG
GCCCAATGCG TCAAGGCGGT GTTCTTCCCG ATCGGCAAGC ACGCGAGCTG GCACCCGGCG
ATCCTCAAGC AGGTGATCGC CGCCGGCCAC ACCGTCGGTT CGCACACCTG GTCGCACGTC
AATCTCGCCA GCAAGCCGTT CGCCGAGGCC AAGAACGAAA TCGAGAAGGG CATCAGCGGC
GTAGCGCAAT CGGCAGGTCA GCCGACCGCG CCGTTCTTCC GCTTTCCGCA GCTGCGCCAG
ACGCCGGAGC TGAAGGCGTA TCTCGGCGAA CGCAACATCG CGACCTTCTC GATCGACGTC
GACTCCGAAG ACTTCCGGAT TCACAAGCCT GATCAGCTCA TCAACGGCGT GATGGCCAAG
CTGAAGAAGG CCGGCAAAGG CATCCTGCTG ATGCACGACT TCCAGAAGTC GACCGCGCAG
GCGCTGCCCG AGCTGCTCGC GCAGCTGAAG GCCGGCGGCT ACAAGATCGT TTTCATCACC
GCCAAGGATC GGGTTACCAC GCTGCCGGAA TACGACGCCC AGGTCGCGCC GGCGCAGCCC
ACCGCCTCGA CCGCAAAGCC GATCGCCAAT GTGATACGCA CCGTCGACTA G
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| Protein sequence | MRKFAVLAAG CSTLAVLVGL GAGRAWFTLT PSKIDAARAP SASEEITTGT IAARWPTPGG
APPRAAQSPA PNIQPARATA DPALNAKPAA LPAPAPVRQT CSNPNALGIS RTVEIDTSGG
PGLGMSQYRD YDFLQPGEVA LTFDDGPWPV NTPAVLAALE AQCVKAVFFP IGKHASWHPA
ILKQVIAAGH TVGSHTWSHV NLASKPFAEA KNEIEKGISG VAQSAGQPTA PFFRFPQLRQ
TPELKAYLGE RNIATFSIDV DSEDFRIHKP DQLINGVMAK LKKAGKGILL MHDFQKSTAQ
ALPELLAQLK AGGYKIVFIT AKDRVTTLPE YDAQVAPAQP TASTAKPIAN VIRTVD
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