| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2052 |
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| Symbol | |
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| ID | 6409712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2223995 |
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| End bp | 2225617 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711938 |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_001991050 |
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| Protein GI | 192290445 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAAGC ACGATCGACA ATCCGCGAGC CGCAGCATCC GGCAGAGCAT GTCGGACCTT
CACACCTGGA CCGGGCTGCT GCTCGGCTGG GTGCTGTATG CGATGTTCCT CACCGGCACG
GTGTCGTTCT TCAAGGAGGA GCTGTCGCAG TGGATGCGGC CGGAACTGCC GCGCGTGACG
CAGGCGCTGG ACCCGGCCGT GGTGGCGGAG CGCGTCGCCG ATGAGATCGG CCGGATCGCG
CCCAACGCGA CGCAGTGGAG CATCAAGCTC CCCGAGGGGC GCAGCAACAG CGTCTATGCG
TTCTGGCGGC TTCCGATCGC GCAGGATGCG CGCGGCTTCG GAGAAGGGCA CTTCGACGCG
GTGACTGGCC GTCAGGTCGA GGCTCGGGGA ACACTGGGCG GCGATTTCTT CTACCGCTTC
CATTTCCAGT TCTACTACAT GTCGCCGTTC TGGGGGCGGC TGCTTGCCGG TCTGGCGGCG
ATGTTCATGC TGATCGCCAT CGTCGCCGGC GTCATCACCC ACAAGAAGAT CTTCACCGAC
TTCTTCACCT TCCGCTGGGG CAAGGGGCAG CGCTCCTGGC TCGACGCCCA CAACGCGCTG
TCGGTGTTCG GCCTGCCATT TCATGTGATG ATCACCTACA CCGGGCTGGT GACGCTAATG
GCGCTGTACG TGCCATGGGG CGAGCGCGCC GCCATCAAGA CGCCCGCCGA GCGCCAGCAG
CTGATGGCGG AGCTCAGTGC TTTCATTCAG CCCGGCAAGC CCGCGGCCGA AGCGGCGCCG
CTCGGGTCGA TCGAAACCAT GGTGCGGCAG GCTCAGGTTC GATGGGGTAC GCCCGATGTC
GGGCGCGTCA ACGCGGCCAA TCCGGGCAAC GCGGCTGCCC GTATAGCGGT GACCCGTGGC
GATGCCGGGC GTGTATCAAT GAGTCCGGAT TACCTGGAGT TCGACGGCGT CACCGGAAAA
CTGCTCACCG TGCATGATCA TGTCGGTGCT GCGGCCGAAA CCCGCGGCGT GCTCTACGCG
CTGCACATCG GGCGGTTCAG CGACCTCGAA ACCCGGTGGC TTTACTTCAT CGTCAGCTTC
ATGGGCACCG CGATGGTCGG TACCGGTCTG GTGATGTGGA CAGTGAAGCG ACGGCAGAAG
CTGCCTGATC CAGAGCGGCC GTATTTCGGA TTCCGTCTGG TCGAGCGGCT CAACATTGCC
AGCATCGCCG GGCTGTCGAT CGCCATGACG GCGTTCCTGT GGGCCAACCG TCTGTTGCCG
ACCGCGATGG CGGAGCGGGC GTTCTGGGAA ATCCATGTGT TCTTCATCGT CTGGGGGCTG
ACCTTGCTCC ACGCACTGCT GCGGCCGGCG CGAGTGGCCT GGGTCGAGCA GCTATGGACG
GCCGCTGCGT TGTTAGCGTT GATCCCGGTG CTCAACGCGA TGACGACGCT GCGTCCGCTG
TGGCACAGCT TCGCTATCGG GGATTGGGTG TTCGTCGGCA CGGATCTGAT GTGCTGGACG
CTGGCGCTGC TGCATGCCGT GCTGGCGATC CGCACCGCGC GTCACGGCGC GCGGGTTCGC
CCGCCGCGCG GCTCGGCGAC ACGCCACGCG CTCCCAACGA TGTCGAGCGA GGCGGCAACA
TGA
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| Protein sequence | MTKHDRQSAS RSIRQSMSDL HTWTGLLLGW VLYAMFLTGT VSFFKEELSQ WMRPELPRVT
QALDPAVVAE RVADEIGRIA PNATQWSIKL PEGRSNSVYA FWRLPIAQDA RGFGEGHFDA
VTGRQVEARG TLGGDFFYRF HFQFYYMSPF WGRLLAGLAA MFMLIAIVAG VITHKKIFTD
FFTFRWGKGQ RSWLDAHNAL SVFGLPFHVM ITYTGLVTLM ALYVPWGERA AIKTPAERQQ
LMAELSAFIQ PGKPAAEAAP LGSIETMVRQ AQVRWGTPDV GRVNAANPGN AAARIAVTRG
DAGRVSMSPD YLEFDGVTGK LLTVHDHVGA AAETRGVLYA LHIGRFSDLE TRWLYFIVSF
MGTAMVGTGL VMWTVKRRQK LPDPERPYFG FRLVERLNIA SIAGLSIAMT AFLWANRLLP
TAMAERAFWE IHVFFIVWGL TLLHALLRPA RVAWVEQLWT AAALLALIPV LNAMTTLRPL
WHSFAIGDWV FVGTDLMCWT LALLHAVLAI RTARHGARVR PPRGSATRHA LPTMSSEAAT
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